CYANA Command: distances set - Revision history

Masayo: /* Parameters */

2009-08-13T10:05:05Z

Parameters

← Older revision		Revision as of 12:05, 13 August 2009
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	== Parameters ==		== Parameters ==

	; selection=''~~string~~'': (default: ''none'')		; selection=''[[distance restraint selection]]'': (default: ''none'')
	; bound=''string'': (default: ''none'')		; bound=''string'': (default: ''none'')
	; weight=''string'': (default: ''none'')		; weight=''string'': (default: ''none'')

Masayo: /* Description */

2009-08-12T12:04:22Z

Description

← Older revision		Revision as of 14:04, 12 August 2009
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	== Description ==		== Description ==

	This command sets properties of the distance restraints that match the given ''selection''. By default, the selection made in the most recent '''distances select''' command is used, or all distance restraints if no selection has been made so far. The following properties that can be set:		This command sets properties of the distance restraints that match the given ''selection''. By default, the selection made in the most recent [[CYANA Commands: distances select\|'''distances select''']] command is used, or all distance restraints if no selection has been made so far. The following properties that can be set:

	:; '''bound''' : Distance bound (in Å), which can be an arbitrary real expression that may contain the symbols '''distance''', '''distdev''', '''distmin''', and '''distmax''' to denote, respectively, the average value, the standard deviation, the minimal value, and the maximal value of the corresponding distance in the selected structures.		:; '''bound''' : Distance bound (in Å), which can be an arbitrary real expression that may contain the symbols '''distance''', '''distdev''', '''distmin''', and '''distmax''' to denote, respectively, the average value, the standard deviation, the minimal value, and the maximal value of the corresponding distance in the selected structures.
	:; '''weight''' : Relative weight		:; '''weight''' : Relative weight
	:; '''confine''' : Confinement limit for violation confinement (in Å)		:; '''confine''' : Confinement limit for violation confinement (in Å)

Masayo: /* Description */

2009-08-07T13:32:53Z

Description

← Older revision		Revision as of 15:32, 7 August 2009
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	== Description ==		== Description ==

	This command sets properties of the distance restraints that match the		This command sets properties of the distance restraints that match the given ''selection''. By default, the selection made in the most recent '''distances select''' command is used, or all distance restraints if no selection has been made so far. The following properties that can be set:
	~~selection~~ ''~~string~~''. By default, the selection made in the most recent
	'''distances select''' command is used, or all distance restraints if no
	selection has been made so far.

	~~Properties that can be set~~:		:; '''bound''' : Distance bound (in Å), which can be an arbitrary real expression that may contain the symbols '''distance''', '''distdev''', '''distmin''', and '''distmax''' to denote, respectively, the average value, the standard deviation, the minimal value, and the maximal value of the corresponding distance in the selected structures.
			:; '''weight''' : Relative weight
	* bound distance bound, given in Angstrom		:; '''confine''' : Confinement limit for violation confinement (in Å)
	* weight relative weight
	* confine confinement limit for violation confinement, given in Angstrom

	~~The value of~~ '''bound''' ~~parameter~~ can be an arbitrary real expression that
	may contain the symbols '''distance''', '''distdev''', '''distmin''', and '''distmax'''
	to denote, respectively, the average value, the standard deviation,
	the minimal value, and ~~the~~ the maximal value of the corresponding
	distance in the selected structures.

Admin: 1 revision

2009-01-29T11:26:55Z

1 revision

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== Parameters ==

; selection=''string'': (default: ''none'')
; bound=''string'': (default: ''none'')
; weight=''string'': (default: ''none'')
; confine=''string'': (default: ''none'')

== Description ==

This command sets properties of the distance restraints that match the
selection ''string''. By default, the selection made in the most recent
'''distances select''' command is used, or all distance restraints if no
selection has been made so far.

Properties that can be set:

* bound distance bound, given in Angstrom
* weight relative weight
* confine confinement limit for violation confinement, given in Angstrom

The value of '''bound''' parameter can be an arbitrary real expression that
may contain the symbols '''distance''', '''distdev''', '''distmin''', and '''distmax'''
to denote, respectively, the average value, the standard deviation,
the minimal value, and the the maximal value of the corresponding
distance in the selected structures.