CYANA Command: write lol - Revision history

Masayo: /* Parameters */

2010-01-12T10:26:24Z

Parameters

← Older revision		Revision as of 12:26, 12 January 2010
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	== Parameters ==		== Parameters ==

	; file=''filename''.lol		;file=''filename''.lol
	:(required) ~~The name of the output lower distance limit file. The~~ default ~~filename extension ".lol" is used unless a filename extension is given explicitly.~~		:(required)
	; ~~sorted~~		;list=''integer''
	: ~~Option to sort the distance restraints by the first and second atom. By~~ default~~, the distance restraints are written in the order in which they are stored in the program, e.g. the order in which they have been read from an input file.~~		:(default: 1)
	; swapped		;nmrstar=''integer''
	~~: Option to output restraints that involve diastereotopic hydrogens or methyl groups after optimal swapping of the stereopartners for minimal target function value.~~		:(default: 2)
	; xplor		;details
	~~: Option to output the file in the format of the program XPLOR instead of the standard [[distance restraint file]] format of the program CYANA.~~		;multiple
	; nocomments		;sorted
	~~: Option to suppress the output of comments such as the number of the peak from which the restraint originated.~~		;swapped
	; append		;xplor
	~~: Option to append the output to the given file. By default, an already existing output file is overwritten.~~		;nocomments
			;append

	== Description ==		== Description ==

Guentert at 21:52, 3 February 2009

2009-02-03T21:52:26Z

← Older revision		Revision as of 23:52, 3 February 2009
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			''Write lower distance limit file''

	== Parameters ==		== Parameters ==

	; file=''filename''.lol (required)		; file=''filename''.lol
			:(required) The name of the output lower distance limit file. The default filename extension ".lol" is used unless a filename extension is given explicitly.
	; sorted		; sorted
			: Option to sort the distance restraints by the first and second atom. By default, the distance restraints are written in the order in which they are stored in the program, e.g. the order in which they have been read from an input file.
	; swapped		; swapped
	; xplor		: Option to output restraints that involve diastereotopic hydrogens or methyl groups after optimal swapping of the stereopartners for minimal target function value.
	; nocomments		; xplor
	; append		: Option to output the file in the format of the program XPLOR instead of the standard [[distance restraint file]] format of the program CYANA.
			; nocomments
			: Option to suppress the output of comments such as the number of the peak from which the restraint originated.
			; append
			: Option to append the output to the given file. By default, an already existing output file is overwritten.

	== Description ==		== Description ==

	Writes a lower ~~limit~~ distance restraint file. ~~Optionally,~~ the ~~output~~		Writes a file with the currently selected lower distance limits in the standard [[distance restraint file]] format of the program CYANA, or optionally in XPLOR format.
	~~may~~ be ~~appended to an existing file~~.
			Instead of the command

			write lol ''filename''.lol

			the shorthand version

			write ''filename''.lol

			can be used if the filename extension is ".lol".

Admin: 1 revision

2009-01-29T11:26:58Z

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== Parameters ==

; file=''filename''.lol (required)
; sorted
; swapped
; xplor
; nocomments
; append

== Description ==

Writes a lower limit distance restraint file. Optionally, the output
may be appended to an existing file.