https://cyana.org/w/index.php?action=history&feed=atom&title=CYANA_Commands%3A_distances_set 2026-06-04T23:40:22Z Revision history for this page on the wiki MediaWiki 1.45.1 https://cyana.org/w/index.php?title=CYANA_Commands:_distances_set&diff=4536&oldid=prev 2009-01-28T23:35:41Z

<p>1 revision</p> <p><b>New page</b></p><div><br /> == Parameters ==<br /> <br /> ; selection=&#039;&#039;string&#039;&#039;: (default: &#039;&#039;none&#039;&#039;)<br /> ; bound=&#039;&#039;string&#039;&#039;: (default: &#039;&#039;none&#039;&#039;)<br /> ; weight=&#039;&#039;string&#039;&#039;: (default: &#039;&#039;none&#039;&#039;)<br /> ; confine=&#039;&#039;string&#039;&#039;: (default: &#039;&#039;none&#039;&#039;)<br /> <br /> == Description ==<br /> <br /> This command sets properties of the distance restraints that match the<br /> selection &#039;&#039;string&#039;&#039;. By default, the selection made in the most recent<br /> &#039;&#039;&#039;distances select&#039;&#039;&#039; command is used, or all distance restraints if no<br /> selection has been made so far.<br /> <br /> Properties that can be set:<br /> <br /> * bound distance bound, given in Angstrom<br /> * weight relative weight<br /> * confine confinement limit for violation confinement, given in Angstrom<br /> <br /> The value of &#039;&#039;&#039;bound&#039;&#039;&#039; parameter can be an arbitrary real expression that<br /> may contain the symbols &#039;&#039;&#039;distance&#039;&#039;&#039;, &#039;&#039;&#039;distdev&#039;&#039;&#039;, &#039;&#039;&#039;distmin&#039;&#039;&#039;, and &#039;&#039;&#039;distmax&#039;&#039;&#039;<br /> to denote, respectively, the average value, the standard deviation,<br /> the minimal value, and the the maximal value of the corresponding<br /> distance in the selected structures.</div>

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