CYANA Macro: cashiftaco - Revision history

Miki at 14:40, 12 January 2010

2010-01-12T14:40:36Z

← Older revision		Revision as of 16:40, 12 January 2010
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	== Description ==		== Description ==

	Generates restraints for the backbone ~~torsion~~ angles Φ and Ψ in proteins by comparing the C<sup>α</sup> chemical shifts with the corresponding random coil values (Spera & Bax, 1991). Angle restraints are derived according to the rules of (Luginbühl et al., 1995). The C<sup>α</sup> random coil shifts are relative to internal TSP. Optionally, an '''offset''' Δω is added to the chemical shifts in the proton list. A warning is printed for C<sup>α</sup> chemical shifts that deviate by more than 15 ppm from their random coil value.		Generates restraints for the backbone dihedral angles Φ and Ψ in proteins by comparing the C<sup>α</sup> chemical shifts with the corresponding random coil values of Spera & Bax (1991). Angle restraints are derived according to the rules of Luginbühl et al. (1995). The C<sup>α</sup> random coil shifts are relative to internal TSP. Optionally, an '''offset''' Δω is added to the chemical shifts in the proton list. A warning is printed for C<sup>α</sup> chemical shifts that deviate by more than 15 ppm from their random coil value.

Admin: /* Description */

2009-08-06T13:53:29Z

Description

← Older revision		Revision as of 15:53, 6 August 2009
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	== Description ==		== Description ==

	Generates restraints for the backbone torsion angles ~~\Phi~~ and  in proteins by comparing the Cα chemical shifts with the corresponding random coil values (Spera & Bax, 1991). Angle restraints are derived according to the rules of (Luginbühl et al., 1995). The C random coil shifts are relative to internal TSP. Optionally, an offset  is added to the chemical shifts in the proton list. A warning is printed for C chemical shifts that deviate by more than 15 ppm from their random coil value.		Generates restraints for the backbone torsion angles Φ and Ψ in proteins by comparing the C<sup>α</sup> chemical shifts with the corresponding random coil values (Spera & Bax, 1991). Angle restraints are derived according to the rules of (Luginbühl et al., 1995). The C<sup>α</sup> random coil shifts are relative to internal TSP. Optionally, an '''offset''' Δω is added to the chemical shifts in the proton list. A warning is printed for C<sup>α</sup> chemical shifts that deviate by more than 15 ppm from their random coil value.

Admin at 13:49, 6 August 2009

2009-08-06T13:49:39Z

← Older revision		Revision as of 15:49, 6 August 2009
Line 6:		Line 6:
	== Description ==		== Description ==

	Generates restraints for the backbone torsion angles  and  in proteins by comparing the Cα chemical shifts with the corresponding random coil values (Spera & Bax, 1991). Angle restraints are derived according to the rules of (Luginbühl et al., 1995). The C random coil shifts are relative to internal TSP. Optionally, an offset  is added to the chemical shifts in the proton list. A warning is printed for C chemical shifts that deviate by more than 15 ppm from their random coil value.		Generates restraints for the backbone torsion angles \Phi and  in proteins by comparing the Cα chemical shifts with the corresponding random coil values (Spera & Bax, 1991). Angle restraints are derived according to the rules of (Luginbühl et al., 1995). The C random coil shifts are relative to internal TSP. Optionally, an offset  is added to the chemical shifts in the proton list. A warning is printed for C chemical shifts that deviate by more than 15 ppm from their random coil value.

Admin at 13:46, 6 August 2009

2009-08-06T13:46:03Z

← Older revision		Revision as of 15:46, 6 August 2009
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	== Parameters ==		== Parameters ==

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	== Description ==		== Description ==

	Generates restraints for the backbone ~~dihedral~~ angles f and y in proteins		Generates restraints for the backbone torsion angles  and  in proteins by comparing the Cα chemical shifts with the corresponding random coil values (Spera & Bax, 1991). Angle restraints are derived according to the rules of (Luginbühl et al., 1995). The C random coil shifts are relative to internal TSP. Optionally, an offset  is added to the chemical shifts in the proton list. A warning is printed for C chemical shifts that deviate by more than 15 ppm from their random coil value.
	by comparing the Ca chemical shifts with the corresponding random coil
	values of Spera & Bax (1991). Angle restraints are derived according to
	the rules of ~~Luginbuehl~~ et al. (1995). The Ca random coil shifts are
	relative to internal TSP. Optionally, an offset Dw is added to the
	chemical shifts in the proton list. A warning is printed for Ca chemical
	shifts that deviate by more than 15 ppm from their random coil value.

Admin: 1 revision

2009-01-29T11:26:58Z

1 revision

New page

== Parameters ==

; offset=''real'': (default: 0.0)
; prooffset=''real'': (default: 2.0)

== Description ==

Generates restraints for the backbone dihedral angles f and y in proteins
by comparing the Ca chemical shifts with the corresponding random coil
values of Spera & Bax (1991). Angle restraints are derived according to
the rules of Luginbuehl et al. (1995). The Ca random coil shifts are
relative to internal TSP. Optionally, an offset Dw is added to the
chemical shifts in the proton list. A warning is printed for Ca chemical
shifts that deviate by more than 15 ppm from their random coil value.