CYANA Macro: dcostat - Revision history

Miki at 14:46, 12 January 2010

2010-01-12T14:46:40Z

← Older revision		Revision as of 16:46, 12 January 2010
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	; file=''filename''.ps: (default: dcostat.ps)		; file=''filename''.ps: (default: dcostat.ps)
			; classes=''integer'': (default: 3)

	== Description ==		== Description ==

	Produces a graphics output file with the given name (a Graf file if the extension is ".grf", or a Postscript file otherwise) with two plots that show the distribution of distance restraints. The first plot shows the number of distance restraints plotted against the residue index difference of the corresponding atoms. The second plot shows the number of short-range (~~between residues ''i'' and ''j'' with \|''i'' - ''j''\| ≤ 1; light grey~~), medium-range (~~1 < \|''i'' - ''j''\| < 5; dark grey~~) and long-range (~~\|''i'' - ''j''\| ≥ 5;~~ black) ~~distance~~ restraints. If the number of ''classes'' is increased to 4, then the short-range distance restraints are further classified as intra-residual (\|''i'' - ''j''\| = 0; white) or sequential (\|''i'' - ''j''\| = 1; light grey).		Produces a graphics output file with the given name (a Graf file if the extension is ".grf", or a Postscript file otherwise) with two plots that show the distribution of distance restraints. The first plot shows the number of distance restraints plotted against the residue index difference of the corresponding atoms. The second plot shows for every residue the number of intra-residual (white), short range (vertically hatched), medium-range (horizontally hatched) and long-range (black) restraints.

Admin at 13:56, 13 August 2009

2009-08-13T13:56:26Z

← Older revision		Revision as of 15:56, 13 August 2009
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	== Description ==		== Description ==

	Produces a graphics output file with the given name (a Graf file if the extension is ".grf", or a Postscript file otherwise) with two plots that show the distribution of distance restraints. The first plot shows the number of distance restraints plotted against the residue index difference of the corresponding atoms. The second plot shows the number of short-range (between residues ''i'' and ''j'' with \| ''i'' - ''j'' \| ≤ 1; light grey), medium-range (1 < \| ''i'' - ''j'' \| < 5; dark grey) and long-range (\| ''i'' - ''j'' \| ≥ 5; black) distance restraints. If the number of ''classes'' is increased to 4, then the short-range distance restraints are further classified as intra-residual (\| ''i'' - ''j'' \| = 0; white) or sequential (\| ''i'' - ''j'' \| = 1; light grey).		Produces a graphics output file with the given name (a Graf file if the extension is ".grf", or a Postscript file otherwise) with two plots that show the distribution of distance restraints. The first plot shows the number of distance restraints plotted against the residue index difference of the corresponding atoms. The second plot shows the number of short-range (between residues ''i'' and ''j'' with \|''i'' - ''j''\| ≤ 1; light grey), medium-range (1 < \|''i'' - ''j''\| < 5; dark grey) and long-range (\|''i'' - ''j''\| ≥ 5; black) distance restraints. If the number of ''classes'' is increased to 4, then the short-range distance restraints are further classified as intra-residual (\|''i'' - ''j''\| = 0; white) or sequential (\|''i'' - ''j''\| = 1; light grey).

Admin: /* Description */

2009-08-12T12:34:01Z

Description

← Older revision		Revision as of 14:34, 12 August 2009
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	== Description ==		== Description ==

	Produces a graphics output file with the given name (a Graf file if the extension is ".grf", or a Postscript file otherwise) with two plots that show the distribution of distance restraints. The first plot shows the number of distance restraints plotted against the residue index difference of the corresponding atoms. The second plot shows the number of short-range (between residues ''i'' and ''j'' with \|''i'' - ''j''\| ≤ 1; light grey), medium-range (1 < \|''i'' - ''j''\| < 5; dark grey) and long-range (\|''i'' - ''j''\| ≥ 5; black) distance restraints. If the number of ''classes'' is increased to 4, then the short-range distance restraints are further classified as intra-residual (\|''i'' - ''j''\| = 0; white) or sequential (\|''i'' - ''j''\| = 1; light grey).		Produces a graphics output file with the given name (a Graf file if the extension is ".grf", or a Postscript file otherwise) with two plots that show the distribution of distance restraints. The first plot shows the number of distance restraints plotted against the residue index difference of the corresponding atoms. The second plot shows the number of short-range (between residues ''i'' and ''j'' with \| ''i'' - ''j'' \| ≤ 1; light grey), medium-range (1 < \| ''i'' - ''j'' \| < 5; dark grey) and long-range (\| ''i'' - ''j'' \| ≥ 5; black) distance restraints. If the number of ''classes'' is increased to 4, then the short-range distance restraints are further classified as intra-residual (\| ''i'' - ''j'' \| = 0; white) or sequential (\| ''i'' - ''j'' \| = 1; light grey).

Admin at 12:29, 12 August 2009

2009-08-12T12:29:29Z

← Older revision		Revision as of 14:29, 12 August 2009
Line 5:		Line 5:
	== Description ==		== Description ==

	Produces a graphics output file with the given name (a Graf file if the extension is ".grf", or a Postscript file otherwise) with two plots that show the distribution of distance restraints. The first plot shows the number of distance restraints plotted against the residue index difference of the corresponding atoms. The second plot shows the number of short-range (between residues ''i'' and ''j'' with \|''i'' - ''j''\|≤ 1; light grey), medium-range (1 < \|''i'' - ''j''\| < 5; dark grey) and long-range (\|''i'' - ''j''\|≥ 5; black) distance restraints. If the number of ''classes'' is increased to 4, then the short-range distance restraints are further classified as intra-residual (\|''i'' - ''j''\| = 0; white) or sequential (\|''i'' - ''j''\| = 1; light grey).		Produces a graphics output file with the given name (a Graf file if the extension is ".grf", or a Postscript file otherwise) with two plots that show the distribution of distance restraints. The first plot shows the number of distance restraints plotted against the residue index difference of the corresponding atoms. The second plot shows the number of short-range (between residues ''i'' and ''j'' with \|''i'' - ''j''\| ≤ 1; light grey), medium-range (1 < \|''i'' - ''j''\| < 5; dark grey) and long-range (\|''i'' - ''j''\| ≥ 5; black) distance restraints. If the number of ''classes'' is increased to 4, then the short-range distance restraints are further classified as intra-residual (\|''i'' - ''j''\| = 0; white) or sequential (\|''i'' - ''j''\| = 1; light grey).

Admin at 12:28, 12 August 2009

2009-08-12T12:28:40Z

← Older revision		Revision as of 14:28, 12 August 2009
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	== Description ==		== Description ==

	Produces a graphics output file with the given name (a Graf file if the extension is ".grf", or a Postscript file otherwise) with two plots that show the distribution of distance restraints. The first plot shows the number of distance restraints plotted against the residue index difference of the corresponding atoms. The second plot shows the number of short-range (between residues ''i'' and ''j'' with \| ''i'' - ''j'' \|≤ 1; light grey), medium-range (1 < \|''i'' - ''j'' \| < 5; dark grey) and long-range (\| ''i'' - ''j'' \|≥ 5; black) distance restraints. If the number of ''classes'' is increased to 4, then the short-range distance restraints are further classified as intra-residual (\| ''i'' - ''j'' \| = 0; white) or sequential (\| ''i'' - ''j'' \| = 1; light grey).		Produces a graphics output file with the given name (a Graf file if the extension is ".grf", or a Postscript file otherwise) with two plots that show the distribution of distance restraints. The first plot shows the number of distance restraints plotted against the residue index difference of the corresponding atoms. The second plot shows the number of short-range (between residues ''i'' and ''j'' with \|''i'' - ''j''\|≤ 1; light grey), medium-range (1 < \|''i'' - ''j''\| < 5; dark grey) and long-range (\|''i'' - ''j''\|≥ 5; black) distance restraints. If the number of ''classes'' is increased to 4, then the short-range distance restraints are further classified as intra-residual (\|''i'' - ''j''\| = 0; white) or sequential (\|''i'' - ''j''\| = 1; light grey).

Admin at 12:26, 12 August 2009

2009-08-12T12:26:55Z

← Older revision		Revision as of 14:26, 12 August 2009
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	== Description ==		== Description ==

	Produces a graphics output file with the given name (a Graf file if the extension is ".grf", or a Postscript file otherwise) with two plots that show the distribution of distance restraints. The first plot shows the number of distance restraints plotted against the residue index difference of the corresponding atoms. The second plot shows the number of short-range (between residues ''i'' and ''j'' with \|''i''-''j''\|≤ 1; light grey), medium-range (1 < \|''i''-''j''\| < 5; dark grey) and long-range (\|''i''-''j''\|≥ 5; black) distance restraints. If the number of ''classes'' is increased to 4, then the short-range distance restraints are further classified as intra-residual (\|''i''-''j''\| = 0; white) or sequential (\|''i''-''j''\| = 1; light grey).		Produces a graphics output file with the given name (a Graf file if the extension is ".grf", or a Postscript file otherwise) with two plots that show the distribution of distance restraints. The first plot shows the number of distance restraints plotted against the residue index difference of the corresponding atoms. The second plot shows the number of short-range (between residues ''i'' and ''j'' with \| ''i'' - ''j'' \|≤ 1; light grey), medium-range (1 < \|''i'' - ''j'' \| < 5; dark grey) and long-range (\| ''i'' - ''j'' \|≥ 5; black) distance restraints. If the number of ''classes'' is increased to 4, then the short-range distance restraints are further classified as intra-residual (\| ''i'' - ''j'' \| = 0; white) or sequential (\| ''i'' - ''j'' \| = 1; light grey).

Admin at 12:25, 12 August 2009

2009-08-12T12:25:42Z

← Older revision		Revision as of 14:25, 12 August 2009
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	== Parameters ==		== Parameters ==

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	== Description ==		== Description ==

	Produces a graphics output file with the given name (a Graf file if the		Produces a graphics output file with the given name (a Graf file if the extension is ".grf", or a Postscript file otherwise) with two plots that show the distribution of distance restraints. The first plot shows the number of distance restraints plotted against the residue index difference of the corresponding atoms. The second plot shows the number of short-range (between residues ''i'' and ''j'' with \|''i''-''j''\|≤ 1; light grey), medium-range (1 < \|''i''-''j''\| < 5; dark grey) and long-range (\|''i''-''j''\|≥ 5; black) distance restraints. If the number of ''classes'' is increased to 4, then the short-range distance restraints are further classified as intra-residual (\|''i''-''j''\| = 0; white) or sequential (\|''i''-''j''\| = 1; light grey).
	extension is ".grf", or a Postscript file otherwise) with two plots that show
	the distribution of distance restraints. The first plot shows the number of
	distance restraints plotted against the residue index difference of the
	corresponding atoms. The second plot shows ~~for every residue~~ the number of
	~~intra-residual (white),~~ short-range (~~vertically hatched~~), medium-range
	(~~horizontally hatched~~) and long-range (black) restraints.

Admin: 1 revision

2009-01-29T11:26:58Z

1 revision

New page

== Parameters ==

; file=''filename''.ps: (default: dcostat.ps)

== Description ==

Produces a graphics output file with the given name (a Graf file if the
extension is ".grf", or a Postscript file otherwise) with two plots that show
the distribution of distance restraints. The first plot shows the number of
distance restraints plotted against the residue index difference of the
corresponding atoms. The second plot shows for every residue the number of
intra-residual (white), short-range (vertically hatched), medium-range
(horizontally hatched) and long-range (black) restraints.