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Cyanatable - Revision history
2026-04-30T12:39:07Z
Revision history for this page on the wiki
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https://cyana.org/w/index.php?title=Cyanatable&diff=3643&oldid=prev
Admin: 1 revision
2009-01-28T18:18:38Z
<p>1 revision</p>
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<td colspan="1" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 20:18, 28 January 2009</td>
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Admin: 1 revision
2009-01-28T18:12:26Z
<p>1 revision</p>
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 20:12, 28 January 2009</td>
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<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div> </div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">= cyanatable =</ins></div></td></tr>
<tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"> </ins></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Synopsis: cyanatable [option] [prefix] [logfile]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Synopsis: cyanatable [option] [prefix] [logfile]</div></td></tr>
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Admin: 1 revision
2009-01-28T17:25:55Z
<p>1 revision</p>
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<td colspan="1" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 19:25, 28 January 2009</td>
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Admin
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Admin: 1 revision
2009-01-28T17:14:13Z
<p>1 revision</p>
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<td colspan="1" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 19:14, 28 January 2009</td>
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Admin: 1 revision
2009-01-28T17:08:23Z
<p>1 revision</p>
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<td colspan="1" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td>
<td colspan="1" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 19:08, 28 January 2009</td>
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Admin
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Admin: 1 revision
2009-01-28T17:06:05Z
<p>1 revision</p>
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 19:06, 28 January 2009</td>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Options:</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>Options:</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div> -h <del style="font-weight: bold; text-decoration: none;"> </del>help</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div> -h help</div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div> -l <del style="font-weight: bold; text-decoration: none;"> </del>long, more detailed output</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div> -l long, more detailed output</div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div> -p <del style="font-weight: bold; text-decoration: none;"> </del>report percentages instead of absolute values</div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div> -p report percentages instead of absolute values</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>== See also ==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>== See also ==</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><br></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>* [[noeassign]]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>* [[noeassign]]</div></td></tr>
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Admin
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Admin: 1 revision
2009-01-28T16:59:45Z
<p>1 revision</p>
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<td colspan="1" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 18:59, 28 January 2009</td>
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Admin: 1 revision
2009-01-28T16:55:57Z
<p>1 revision</p>
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<td colspan="1" style="background-color: #fff; color: #202122; text-align: center;">← Older revision</td>
<td colspan="1" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 18:55, 28 January 2009</td>
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Admin: 1 revision
2009-01-28T15:49:04Z
<p>1 revision</p>
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<td colspan="1" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 17:49, 28 January 2009</td>
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Admin
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Admin: 1 revision
2009-01-28T15:45:43Z
<p>1 revision</p>
<p><b>New page</b></p><div><br />
Synopsis: cyanatable [option] [prefix] [logfile]<br />
<br />
The '''cyanatable''' shell script produces a summary table of a combined<br />
automated NOESY assignment and structure calculation run executed with<br />
the '''noeassign''' macro. Statistics on the NOESY peak assignments, the<br />
upper distance bounds, and the structure calculation are extracted from<br />
output files produced by '''noeassign''' and arranged in a table with one<br />
column for each cycle of combined automated NOESY assignment and<br />
structure calculation. The standard output from the '''noeassign''' run must<br />
have been collected in a log file called AUTO.out, CANDID.out, CALC.out,<br />
''prefix''.out, or ''logfile''. <br />
<br />
If present, the given ''prefix'' is prepended to all other input file<br />
names. If, for instance, ''prefix'' is '''run1''', then the '''cyanatable'''<br />
script will look for files named '''run1cycle1.noa''', '''run1cycle1.ovw''' etc.<br />
instead of the files with default file names '''cycle1.noa''', '''cycle1.ovw'''<br />
etc.<br />
<br />
This command can be invoked from the Unix shell or from within CYANA.<br />
The command syntax follows Unix (not INCLAN) conventions.<br />
<br />
Options:<br />
<br />
-h help<br />
-l long, more detailed output<br />
-p report percentages instead of absolute values<br />
<br />
== See also ==<br />
<br />
* [[noeassign]]</div>
Admin