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Distances make - Revision history
2026-04-20T02:21:40Z
Revision history for this page on the wiki
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https://cyana.org/w/index.php?title=Distances_make&diff=3719&oldid=prev
Admin: 1 revision
2009-01-28T18:18:39Z
<p>1 revision</p>
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 20:18, 28 January 2009</td>
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https://cyana.org/w/index.php?title=Distances_make&diff=2917&oldid=prev
Admin: 1 revision
2009-01-28T18:12:27Z
<p>1 revision</p>
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 20:12, 28 January 2009</td>
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https://cyana.org/w/index.php?title=Distances_make&diff=2105&oldid=prev
Admin: 1 revision
2009-01-28T17:25:56Z
<p>1 revision</p>
<p><b>New page</b></p><div><br />
== Parameters ==<br />
<br />
; first=''string'' (required)<br />
; second=''string'' (required)<br />
; levels=''integer range'': (default: -99999..99999)<br />
; distance=''real range'': (default: 0.0..99999.9)<br />
; upl=''real'': (default: 1.0)<br />
; lol=''real'': (default: 1.0)<br />
; weight=''real'': (default: 1.0)<br />
; confine=''real'': (default: 1.0E20)<br />
; ambiguous <br />
<br />
== Description ==<br />
<br />
This command generates a new distance restraint (an upper limit<br />
unless the option lol is set) of d A between all atoms matching the<br />
first atom selection and those matching the second atom selection. A<br />
weight might be specified.<br />
<br />
This command adds new distance restraints. Distance restraints<br />
are added between atoms selected by the '''first''' and '''second''' atom<br />
selections, respectively. If, in addition, structures are present,<br />
then distance restraints will be added only for atom pairs for which<br />
the average distance in the selected structures is within the range<br />
given by the '''distance''' parameter.<br />
<br />
The upper distance bound, the lower distance bound, the relative<br />
weight, and the violation confinement limit are set as defined by the<br />
'''upl''', '''lol''', '''weight''', and '''confine''' parameters.</div>
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