Software from P. Güntert: Difference between revisions

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(New page: Software developed by the group and earlier by P. Güntert and collaborators at ETH Zürich. == Available software == * ATNOS: Automated NOESY peak picking * AUTOPSY: Automated peak pi...)
 
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== Available software ==  
== Available software ==  


* ATNOS: Automated NOESY peak picking
* [[Automated NOESY peak picking|ATNOS]]: Automated NOESY peak picking


* AUTOPSY: Automated peak picking in NMR spectroscopy
* AUTOPSY: Automated peak picking in NMR spectroscopy

Revision as of 11:11, 8 December 2008

Software developed by the group and earlier by P. Güntert and collaborators at ETH Zürich.

Available software

  • ATNOS: Automated NOESY peak picking
  • AUTOPSY: Automated peak picking in NMR spectroscopy
  • CANDID: Combined automated NOE assignment and structure determination module
  • COCO: Compare covalent geometry
  • COFIMA: Coordinate and constraint file manipulation
  • CYANA: Combined assignment and dynamics algorithm for NMR applications
  • GARANT: General algorithm for resonance assignment
  • INFIT: Coupling constants from inverse Fourier transformation of in-phase multiplets
  • MAPPER: Sequence-specific NMR assignment of proteins by global sequence mapping
  • POMA: Product operator formalism in Mathematica
  • PROSA: Processing algorithms
  • XEASY: X-windows version of ETH Automated Spectroscopy

Other software

Not yet available, not separately available, or outdated software.

  • ASNO: Semi-automated assignment of NOEs
  • CALIBA: Calibration of NOE distance constraints
  • DIANA: Distance geometry algorithm for NMR applications
  • DYANA: Dynamics algorithm for NMR applications
  • EASY: ETH automated spectroscopy
  • FLYA: Fully automated structure determination of proteins in solution
  • FOUND: Grid search and stereospecific assignment algorithm
  • GLOMSA: Global method for stereo-specific assignments
  • HABAS: Grid search and stereospecific assignment algorithm
  • INCLAN: Interactive command language
  • OPAL: Energy refinement and MD simulation algorithm for vector suporcomputers
  • OPALp: Energy refinement and molecular dynamics simulation algorithm