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NMR protein structures co-authored by P. Güntert.
NMR protein structures co-authored by P. Güntert.


* Ohnishi, S., Güntert, P., Koshiba, S., Tomizawa, T., Akasaka, R., Tochio, T., Sato, M., Inoue, M., Harada, T., Watanabe, S., Tanaka, A., Shirouzu, Kigawa, T. & Yokoyama, S. Solution structure of an atypical WW domain in a novel β-clam-like dimeric form. FEBS Lett. 581, 462-468 (2007).<br>'''PDB [http://www.rcsb.org/pdb/explore.do?structureId=2DWV 2DWV]'''
{|
http://www.rcsb.org/pdb/images/2dwv_asym_r_250.jpg
|[[image:2e29_asym_r_250.jpg‎|120px|link=http://www.rcsb.org/pdb/explore.do?structureId=2E29]]
|Ohnishi, S. Pääkkönen, K., Koshiba, S., Tochio, N., Sato, M., Kobayashi, N., Harada, T., Watanabe, S., Muto, Y., Güntert, P., Tanaka, A., Kigawa, T. & Yokoyama, S. Solution structure of the GUCT domain from human RNA helicase II/Guβ reveals the RRM fold, but implausible RNA interactions. [http://dx.doi.org/10.1002/prot.22138 Proteins 74, 133–144 (2009)]


* Kuwasako, K., He, F., Inoue, M., Tanaka, A., Sugano, S., Güntert, P., Muto, Y. & Yokoyama, S. Solution structures of the SURP domains and the subunit-assembly mechanism within the splicing factor SF3a complex in 17S U2 snRNP. Structure 14, 1677-1689 (2006).
'''PDB [http://www.rcsb.org/pdb/explore.do?structureId=2E29 2E29]'''
PDB 2DT6 (SURP1) 2DT7 (SURP2-SF3a60)
|-


* ENTH-VHS domain At3g16270(9-135) from Arabidopsis thaliana.
|[[image:2jz4_asym_r_250.jpg‎|120px|link=http://www.rcsb.org/pdb/explore.do?structureId=2JZ4]]
|Takeda, M., Sugimori, N., Torizawa, T., Terauchi, T., Ono, A. M., Yagi, H., Yamaguchi, Y., Kato, K., Ikeya, T., Güntert, P., Aceti, D. J., Markley, J. L. & Kainosho, M. Structure of the putative 32 kDa myrosinase binding protein from Arabidopsis (At3g16450.1) as determined by the SAIL-NMR method. [http://dx.doi.org/10.1111/j.1742-4658.2008.06717.x FEBS J. 275, 5873–5884 (2008)]
 
'''PDB [http://www.rcsb.org/pdb/explore.do?structureId=2JZ4 2JZ4]''' [http://www.rcsb.org/pdb/download/downloadFile.do?fileFormat=NMR&compression=NO&structureId=2JZ4 NMR restraints] '''BMRB [http://www.bmrb.wisc.edu./data_library/generate_summary.php?bmrbId=15607 15607]'''
|-
 
|[[image:2ba3_asym_r_250.jpg‎|120px|link=http://www.rcsb.org/pdb/explore.do?structureId=2BA3]]
|Yoshida, H., Furuya, N., Lin, Y. J., Güntert, P., Komano, T. & Kainosho, M. Structural basis of the role of the NikA ribbon-helix-helix domain in initiating bacterial conjugation. [http://dx.doi.org/10.1016/j.jmb.2008.09.067 J. Mol. Biol. 384, 690–701 (2008)]
 
'''PDB [http://www.rcsb.org/pdb/explore.do?structureId=2BA3 2BA3]''' '''BMRB [http://www.bmrb.wisc.edu./data_library/generate_summary.php?bmrbId=15784 15784]'''
|-
 
|[[image:2jns_asym_r_250.jpg‎|120px|link=http://www.rcsb.org/pdb/explore.do?structureId=2JNS]]
|Lin, Y. J., Umehara, T., Inoue, M., Saito, K., Kigawa, T., Jang, M. K., Ozato, K., Yokoyama, S., Padmanabhan, B., Güntert, P. Solution structure of the extraterminal domain of the bromodomain-containing protein BRD4. [http://dx.doi.org/10.1110/ps.037580.108 Protein Sci. 17, 2174–2179 (2008)]
 
'''PDB [http://www.rcsb.org/pdb/explore.do?structureId=2JNS 2JNS]''' '''BMRB [http://www.bmrb.wisc.edu./data_library/generate_summary.php?bmrbId=15125 15125]'''
|-
 
|[[image:2ron_asym_r_250.jpg‎|120px|link=http://www.rcsb.org/pdb/explore.do?structureId=2RON]]
|Koglin, A., Löhr, F., Bernhard, F., Rogov, V. R., Frueh, D. P., Strieter, E. R., Mofid, M. R., Güntert, P., Wagner, G., Walsh, C. T., Marahiel, M. A. & Dötsch, V. Structural basis for the selectivity of the external thioesterase of the surfactin-synthetase. [http://dx.doi.org/10.1038/nature07161 Nature 454, 907–911 (2008)]
 
'''PDB [http://www.rcsb.org/pdb/explore.do?structureId=2RON 2RON]''' [http://www.rcsb.org/pdb/download/downloadFile.do?fileFormat=NMR&compression=NO&structureId=2RON NMR restraints] (SrfTEII)<br>'''PDB [http://www.rcsb.org/pdb/explore.do?structureId=2K2Q 2K2Q]''' (complex of SrfTEII and H state TycC3–PCP)
|-
 
|[[image:1whv_asym_r_250.jpg‎|120px|link=http://www.rcsb.org/pdb/explore.do?structureId=2RNE]]
|Nagata, T., Suzuki, S., Endo, R., Shirouzu, M., Terada, T., Inoue, M., Kigawa, T, Güntert, P., Hayashizaki, Y., Muto, Y. & Yokoyama, S. The RRM domain of poly(A)-specific ribonuclease (PARN) has a non-canonical binding site for mRNA cap analog recognition. [http://dx.doi.org/10.1093/nar/gkn458 Nucl. Acids Res. 36, 4754–4767 (2008)]
 
'''PDB [http://www.rcsb.org/pdb/explore.do?structureId=1WHV 1WHV]''' (free form)<br>
'''PDB [http://www.rcsb.org/pdb/explore.do?structureId=2ROK 2ROK]''' (cap-bound form)
|-
 
|[[image:2jw8_asym_r_250.jpg‎|120px|link=http://www.rcsb.org/pdb/explore.do?structureId=2JO8]]
|Takeda, M., Chang, C. K., Ikeya, T., Güntert, P., Chang, Y. H., Hsu, Y. L., Huang, T. H. & Kainosho, M. Solution structure of the C-terminal dimerization domain of SARS coronavirus nucleocapsid protein determined by the SAIL-NMR method. [http://dx.doi.org/10.1016/j.jmb.2007.11.093 J. Mol. Biol. 380, 608–622 (2008)]
 
'''PDB [http://www.rcsb.org/pdb/explore.do?structureId=2JW8 2JW8]''' '''BMRB [http://www.bmrb.wisc.edu./data_library/generate_summary.php?bmrbId=15511 15511]'''
|-
 
|[[image:2rne_asym_r_250.jpg‎|120px|link=http://www.rcsb.org/pdb/explore.do?structureId=2RNE]]
|Kuwasako, K., Takahashi, M., Tochio, N., Abe, C., Tsuda, K., Inoue, M., Terada, T., Shirouzu, M., Kobayashi, N., Kigawa, T., Taguchi, S., Tanaka, A., Hayashizaki, Y., Güntert, P., Muto, Y. & Yokoyama, S. Solution structure of the second RNA recognition motif (RRM) domain of murine T cell intracellular antigen-1 (TIA-1) and its RNA recognition mode. [http://dx.doi.org/10.1021/bi7024723 Biochemistry 47, 6437–6450 (2008)]
 
'''PDB [http://www.rcsb.org/pdb/explore.do?structureId=2RNE 2RNE]'''
|-
 
|[[image:2fho asym r 250.jpg‎|120px|link=http://www.rcsb.org/pdb/explore.do?structureId=2FHO]]
|Kuwasako, K., Dohmae, N., Inoue, M., Shirouzu, M., Taguchi, S., Güntert, P., Séraphin, B., Muto, Y. & Yokoyama, S. Complex assembly mechanism and an RNA-binding mode of the human p14-SF3b155 spliceosomal protein complex identified by NMR solution structure and functional analyses. [http://dx.doi.org/10.1002/prot.21839 Proteins 71, 1617–1636 (2008)]
 
'''PDB [http://www.rcsb.org/pdb/explore.do?structureId=2FHO 2FHO]''' [ftp://ftp.rcsb.org/pub/pdb/data/structures/all/nmr_restraints/2fho.mr.Z NMR restraints]
|-
 
 
|[[image:2jo8_asym_r_250.jpg‎|120px|link=http://www.rcsb.org/pdb/explore.do?structureId=2JO8]]
|Hwang, E., Ryu, K. S., Pääkkönen, K., Güntert, P., Cheong, H. K., Lim, D. S., Lee, J. O., Jeon, Y. H. & Cheong, C. Structural insight into dimeric interaction of the SARAH domains from Mst1 and RASSF family proteins in the apoptosis pathway. [http://dx.doi.org/10.1073/pnas.0610716104 Proc. Natl. Acad. Sci. USA. 104, 9236–9241 (2007)]
 
'''PDB [http://www.rcsb.org/pdb/explore.do?structureId=2JO8 2JO8]''' [ftp://ftp.rcsb.org/pub/pdb/data/structures/all/nmr_restraints/2dcp.mr.Z NMR restraints]
|-
 
|[[image:2dwv asym r 250.jpg|120px|link=http://www.rcsb.org/pdb/explore.do?structureId=2DWV]]
|Ohnishi, S. Güntert, P., Koshiba, S., Tomizawa, T., Akasaka, R., Tochio, N., Sato, M., Inoue, M., Harada, T., Watanabe, S., Tanaka, T., Shirouzu, M., Kigawa, T. & Yokoyama, S. Solution structure of an atypical WW domain in a novel β-clam-like dimeric form. [http://dx.doi.org/10.1016/j.febslet.2007.01.008 FEBS Lett. 581, 462–468 (2007)]
 
'''PDB [http://www.rcsb.org/pdb/explore.do?structureId=2DWV 2DWV]'''
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Kuwasako, K., He, F., Inoue, M., Tanaka, A., Sugano, S., Güntert, P., Muto, Y. & Yokoyama, S. Solution structures of the SURP domains and the subunit-assembly mechanism within the splicing factor SF3a complex in 17S U2 snRNP. Structure 14, 1677-1689 (2006).
 
'''PDB [http://www.rcsb.org/pdb/explore.do?structureId=2DT6 2DT6]''' (SURP1)<br>'''PDB [http://www.rcsb.org/pdb/explore.do?structureId=2DT7 2DT7]''' (SURP2-SF3a60)
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|ENTH-VHS domain At3g16270(9-135) from ''Arabidopsis thaliana''.<br>López-Méndez, B. & Güntert, P. Automated protein structure determination from NMR spectra. J. Am. Chem. Soc. 128, 13112-13122 (2006).
 
'''PDB [http://www.rcsb.org/pdb/explore.do?structureId=2DCP 2DCP]''' [ftp://ftp.rcsb.org/pub/pdb/data/structures/all/nmr_restraints/2dcp.mr.Z NMR restraints]
 
Note: Automated structure determination with [[FLYA]]. Structure does not supersede the original deposition 1VDY.
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Rhodanese homology domain At3g16270(175-295) from ''Arabidopsis thaliana''.
López-Méndez, B. & Güntert, P. Automated protein structure determination from NMR spectra. J. Am. Chem. Soc. 128, 13112-13122 (2006).
López-Méndez, B. & Güntert, P. Automated protein structure determination from NMR spectra. J. Am. Chem. Soc. 128, 13112-13122 (2006).
PDB 2DCP NMR restraints
Note: Automated structure determination with FLYA. Structure does not supersede the original deposition 1VDY.


* Rhodanese homology domain At3g16270(175-295) from Arabidopsis thaliana.
'''PDB [http://www.rcsb.org/pdb/explore.do?structureId=2DCQ 2DCQ]''' [ftp://ftp.rcsb.org/pub/pdb/data/structures/all/nmr_restraints/2dcq.mr.Z NMR restraints]
López-Méndez, B. & Güntert, P. Automated protein structure determination from NMR spectra. J. Am. Chem. Soc. 128, 13112-13122 (2006).
 
PDB 2DCQ NMR restraints
Note: Automated structure determination with FLYA. Structure does not supersede the original deposition 1VEE.
Note: Automated structure determination with FLYA. Structure does not supersede the original deposition 1VEE.
|-
|[[image:2dwv asym r 250.jpg|120px]]
|Src homology domain 2 from the human feline sarcoma oncogene Fes.
López-Méndez, B. & Güntert, P. Automated protein structure determination from NMR spectra. J. Am. Chem. Soc. 128, 13112-13122 (2006).<br>'''PDB [http://www.rcsb.org/pdb/explore.do?structureId=2DCR 2DCR]''' [ftp://ftp.rcsb.org/pub/pdb/data/structures/all/nmr_restraints/2dcr.mr.Z NMR restraints]<br>Note: Automated structure determination with FLYA. Structure does not supersede the original deposition 1WQU.
|-


* Src homology domain 2 from the human feline sarcoma oncogene Fes.
|[[image:2dwv asym r 250.jpg|120px]]
López-Méndez, B. & Güntert, P. Automated protein structure determination from NMR spectra. J. Am. Chem. Soc. 128, 13112-13122 (2006).
|NikA N-terminal fragment.
PDB 2DCR NMR restraints
Note: Automated structure determination with FLYA. Structure does not supersede the original deposition 1WQU.
NikA N-terminal fragment.
Yoshida, H., Furuya, N., Lin, Y. J., Güntert, P., Komano, T. & Kainosho, M.
Yoshida, H., Furuya, N., Lin, Y. J., Güntert, P., Komano, T. & Kainosho, M.
PDB 2BA3
'''PDB [http://www.rcsb.org/pdb/explore.do?structureId=2BA3 2BA3]'''
Jurt, S., Aemissegger, A., Güntert, P., Zerbe, O. & Hilvert, D. A photoswitchable miniprotein based on the sequence of avian pancreatic polypeptide. Angew. Chem. Int. Ed. 45, 6297-6300 (2006).
|-
PDB 2H4B NMR restraints (cis-1-PP) 2H3S NMR restraints (cis-1-PP bound to DPC micelles) 2H3T NMR restraints (trans-1-PP bound to DPC micelles)
 
Hamada, T., Ito, Y., Abe, T., Hayashi, F., Güntert, P., Inoue, M., Kigawa, T., Terada, T., Shirouzu, M., Yoshida, M., Tanaka, A., Sugano, S., Yokoyama, S. & Hirota, H. Solution structure of the antifreeze-like domain of human sialic acid synthase. Protein Sci. 15, 1010-1016 (2006).
|[[image:2dwv asym r 250.jpg|120px]]
|Jurt, S., Aemissegger, A., Güntert, P., Zerbe, O. & Hilvert, D. A photoswitchable miniprotein based on the sequence of avian pancreatic polypeptide. Angew. Chem. Int. Ed. 45, 6297-6300 (2006).
'''PDB [http://www.rcsb.org/pdb/explore.do?structureId=2H4B 2H4B]''' [ftp://ftp.rcsb.org/pub/pdb/data/structures/all/nmr_restraints/2h4b.mr.Z NMR restraints] (cis-1-PP)<br>'''PDB [http://www.rcsb.org/pdb/explore.do?structureId=2H3S 2H3S]''' [ftp://ftp.rcsb.org/pub/pdb/data/structures/all/nmr_restraints/2h3s.mr.Z NMR restraints] (cis-1-PP bound to DPC micelles)<br>'''PDB [http://www.rcsb.org/pdb/explore.do?structureId=2H3T 2H3T]''' [ftp://ftp.rcsb.org/pub/pdb/data/structures/all/nmr_restraints/2h3t.mr.Z NMR restraints] (trans-1-PP bound to DPC micelles)
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Hamada, T., Ito, Y., Abe, T., Hayashi, F., Güntert, P., Inoue, M., Kigawa, T., Terada, T., Shirouzu, M., Yoshida, M., Tanaka, A., Sugano, S., Yokoyama, S. & Hirota, H. Solution structure of the antifreeze-like domain of human sialic acid synthase. Protein Sci. 15, 1010-1016 (2006).
PDB 1WVO NMR restraints
PDB 1WVO NMR restraints
Aachmann, F. L., Svanem, B. I. G., Güntert, P., Petersen, S. B., Valla, S. & Wimmer, R. NMR structure of the R-module - A parallel β-roll subunit from an Azotobacter vinelandii mannuronan C-5 epimerase. J. Biol. Chem. 281, 7350-7356 (2006).
 
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Aachmann, F. L., Svanem, B. I. G., Güntert, P., Petersen, S. B., Valla, S. & Wimmer, R. NMR structure of the R-module - A parallel β-roll subunit from an Azotobacter vinelandii mannuronan C-5 epimerase. J. Biol. Chem. 281, 7350-7356 (2006).
PDB 2AGM NMR restraints
PDB 2AGM NMR restraints
Stereo-array isotope labeled (SAIL) maltodextrin-binding protein MBP.
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Stereo-array isotope labeled (SAIL) maltodextrin-binding protein MBP.
Kainosho, M., Torizawa, T., Iwashita, Y., Terauchi, T., Ono, A. M. & Güntert, P. Optimal isotope labelling for NMR protein structure determinations. Nature 440, 52-57 (2006).
Kainosho, M., Torizawa, T., Iwashita, Y., Terauchi, T., Ono, A. M. & Güntert, P. Optimal isotope labelling for NMR protein structure determinations. Nature 440, 52-57 (2006).
PDB 2D21
PDB 2D21
BMRB 6807
BMRB 6807
Stereo-array isotope labeled (SAIL) calmodulin.
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Stereo-array isotope labeled (SAIL) calmodulin.
Kainosho, M., Torizawa, T., Iwashita, Y., Terauchi, T., Ono, A. M. & Güntert, P. Optimal isotope labelling for NMR protein structure determinations. Nature 440, 52-27 (2006).
Kainosho, M., Torizawa, T., Iwashita, Y., Terauchi, T., Ono, A. M. & Güntert, P. Optimal isotope labelling for NMR protein structure determinations. Nature 440, 52-27 (2006).
PDB 1X02
PDB 1X02
BMRB 6541
BMRB 6541
Li, H., Inoue, M., Yabuki, T., Aoki, M., Seki, E., Matsuda, T., Nunokawa, E., Motoda, Y., Kobayashi, A., Terada, T., Shirouzu, M., Koshiba, S., Lin, Y. J., Güntert, P., Suzuki, H., Hayashizaki, Y., Kigawa, T. & Yokoyama, S. Solution structure of the mouse enhancer of rudimentary protein reveals a novel fold. J. Biomol. NMR 32, 329-334 (2005).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Li, H., Inoue, M., Yabuki, T., Aoki, M., Seki, E., Matsuda, T., Nunokawa, E., Motoda, Y., Kobayashi, A., Terada, T., Shirouzu, M., Koshiba, S., Lin, Y. J., Güntert, P., Suzuki, H., Hayashizaki, Y., Kigawa, T. & Yokoyama, S. Solution structure of the mouse enhancer of rudimentary protein reveals a novel fold. J. Biomol. NMR 32, 329-334 (2005).
PDB 1WWQ
PDB 1WWQ
Scott, A., Pantoja-Uceda, D., Koshiba, S., Inoue, M., Kigawa, T., Terada, T., Shirouzu, M., Tanaka, A., Sugano, S., Yokoyama, S. & Güntert, P. Solution structure of the Src homology 2 domain from the human feline sarcoma oncogene Fes. J. Biomol. NMR 31, 357-361 (2005).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Scott, A., Pantoja-Uceda, D., Koshiba, S., Inoue, M., Kigawa, T., Terada, T., Shirouzu, M., Tanaka, A., Sugano, S., Yokoyama, S. & Güntert, P. Solution structure of the Src homology 2 domain from the human feline sarcoma oncogene Fes. J. Biomol. NMR 31, 357-361 (2005).
PDB 1WQU
PDB 1WQU
BMRB 6331
BMRB 6331
Nameki, N., Tochio, N., Koshiba, S., Tochio, N., Inoue, M., Yabuki, T., Aoki, M., Seki, E., Matsuda, T., Saito, M., Ikari, M., Watanabe, M., Terada, T., Shirouzu, M., Yoshida, M., Hirota, H., Tanaka, A., Hayashizaki, Y., Güntert, P., Kigawa, T. & Yokoyama, S. Solution structure of the PWWP domain of the hepatoma-derived growth factor family. Prot. Sci. 14, 756-764 (2005).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Nameki, N., Tochio, N., Koshiba, S., Tochio, N., Inoue, M., Yabuki, T., Aoki, M., Seki, E., Matsuda, T., Saito, M., Ikari, M., Watanabe, M., Terada, T., Shirouzu, M., Yoshida, M., Hirota, H., Tanaka, A., Hayashizaki, Y., Güntert, P., Kigawa, T. & Yokoyama, S. Solution structure of the PWWP domain of the hepatoma-derived growth factor family. Prot. Sci. 14, 756-764 (2005).
PDB 1N27
PDB 1N27
Calzolai, L., Lysek, D. A., Pérez, D. R., Güntert, P. & Wüthrich, K. Prion protein NMR structures of chicken, turtle and frog. Proc. Natl. Acad. Sci. USA 102, 651-655 (2005).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Calzolai, L., Lysek, D. A., Pérez, D. R., Güntert, P. & Wüthrich, K. Prion protein NMR structures of chicken, turtle and frog. Proc. Natl. Acad. Sci. USA 102, 651-655 (2005).
PDB 1U3M NMR restraints (chicken PrP(121-225)) 1U5L NMR restraints (turtle PrP(121-225)) 1XU0 NMR restraints (frog PrP(90-222))
PDB 1U3M NMR restraints (chicken PrP(121-225)) 1U5L NMR restraints (turtle PrP(121-225)) 1XU0 NMR restraints (frog PrP(90-222))
BMRB 6269 (chicken PrP(128-242)) 6270 (chicken PrP(25-242)) 6282 (turtle PrP(121-225))
BMRB 6269 (chicken PrP(128-242)) 6270 (chicken PrP(25-242)) 6282 (turtle PrP(121-225))
Lysek, D. A., Schorn, C., Nivon, L. G., Esteve-Moya, V., Christen, B., Calzolai, L., von Schroetter, C., Fiorito, F., Herrmann, T., Güntert, P. & Wüthrich, K. Prion protein NMR structures of cat, dog, pig and sheep. Proc. Natl. Acad. Sci. USA 102, 640-645 (2005).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Lysek, D. A., Schorn, C., Nivon, L. G., Esteve-Moya, V., Christen, B., Calzolai, L., von Schroetter, C., Fiorito, F., Herrmann, T., Güntert, P. & Wüthrich, K. Prion protein NMR structures of cat, dog, pig and sheep. Proc. Natl. Acad. Sci. USA 102, 640-645 (2005).
PDB 1XYJ NMR restraints (cat PrP(121-231)) 1XYK NMR restraints (dog PrP(121-231)) 1XYQ NMR restraints (pig PrP(121-231)) 1XYU NMR restraints (sheep PrP[H168](121-231)) 1Y2S NMR restraints (sheep PrP[R168](121-231))
PDB 1XYJ NMR restraints (cat PrP(121-231)) 1XYK NMR restraints (dog PrP(121-231)) 1XYQ NMR restraints (pig PrP(121-231)) 1XYU NMR restraints (sheep PrP[H168](121-231)) 1Y2S NMR restraints (sheep PrP[R168](121-231))
BMRB 6377 (cat PrP(121-231)) 6378 (dog PrP(121-231)) 6380 (pig PrP(121-231)) 6381 (sheep PrP[H168](121-231)) 6403 (sheep PrP[H168](121-231))
BMRB 6377 (cat PrP(121-231)) 6378 (dog PrP(121-231)) 6380 (pig PrP(121-231)) 6381 (sheep PrP[H168](121-231)) 6403 (sheep PrP[H168](121-231))
Pääkkönen, K., Tossavainen, H., Permi, P., Rakkolainen, H., Rauvala, H., Raulo, E., Kilpeläinen, I. & Güntert, P. Solution structures of the first and fourth TSR domains of F-spondin. Proteins 64, 665-672 (2006).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Pääkkönen, K., Tossavainen, H., Permi, P., Rakkolainen, H., Rauvala, H., Raulo, E., Kilpeläinen, I. & Güntert, P. Solution structures of the first and fourth TSR domains of F-spondin. Proteins 64, 665-672 (2006).
PDB 1SZL (TSR1) 1VEX (TSR4)
PDB 1SZL (TSR1) 1VEX (TSR4)
ENTH-VHS domain At3g16270 from Arabidopsis thaliana.
* ENTH-VHS domain At3g16270 from Arabidopsis thaliana.
PDB 1VDY
PDB 1VDY
BMRB 5928
BMRB 5928
Iwai, H., Forrer, P., Plückthun, A. & Güntert, P. NMR solution structure of the monomeric form of the bacteriophage λ capsid stabilizing protein gpD. J. Biomol. NMR 31, 351-356 (2005).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Iwai, H., Forrer, P., Plückthun, A. & Güntert, P. NMR solution structure of the monomeric form of the bacteriophage λ capsid stabilizing protein gpD. J. Biomol. NMR 31, 351-356 (2005).
PDB 1VD0
PDB 1VD0
BMRB 4936
BMRB 4936
Pantoja-Uceda, D., López-Méndez, B., Koshiba, S., Inoue, M., Kigawa, T., Terada, T., Shirouzu, M., Tanaka, A., Seki, M., Shinozaki, K., Yokoyama, S. & Güntert, P. Solution structure of the rhodanese homology domain At4g01050(175-295) from Arabidopsis thaliana. Prot. Sci. 14, 224-230 (2005).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Pantoja-Uceda, D., López-Méndez, B., Koshiba, S., Inoue, M., Kigawa, T., Terada, T., Shirouzu, M., Tanaka, A., Seki, M., Shinozaki, K., Yokoyama, S. & Güntert, P. Solution structure of the rhodanese homology domain At4g01050(175-295) from Arabidopsis thaliana. Prot. Sci. 14, 224-230 (2005).
PDB 1VEE
PDB 1VEE
BMRB 5929
BMRB 5929
Nameki, N., Yoneyama, M., Koshiba, S., Tochio, N., Inoue, M., Seki, E., Matsuda, T., Tomo, Y., Harada, T., Saito, K., Kobayashi, N., Yabuki, T., Aoki, M., Nunokawa, E., Matsuda, N., Sakagami, N., Terada, T., Shirouzu, M., Yoshida, M., Hirota, H., Osanai, T., Tanaka, A., Arakawa, T., Carninci, P., Kawai, J., Hayashizaki, Y., Kinoshita, K., Güntert, P., Kigawa, T. & Yokoyama, S. Solution structure of the RWD domain of the mouse GCN2 protein. Prot. Sci. 13, 2089-2100 (2004).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Nameki, N., Yoneyama, M., Koshiba, S., Tochio, N., Inoue, M., Seki, E., Matsuda, T., Tomo, Y., Harada, T., Saito, K., Kobayashi, N., Yabuki, T., Aoki, M., Nunokawa, E., Matsuda, N., Sakagami, N., Terada, T., Shirouzu, M., Yoshida, M., Hirota, H., Osanai, T., Tanaka, A., Arakawa, T., Carninci, P., Kawai, J., Hayashizaki, Y., Kinoshita, K., Güntert, P., Kigawa, T. & Yokoyama, S. Solution structure of the RWD domain of the mouse GCN2 protein. Prot. Sci. 13, 2089-2100 (2004).
PDB 1UKX
PDB 1UKX
Fernández, C., Hilty, C., Wider, G., Güntert, P. & Wüthrich, K. NMR Structure of the integral membrane protein OmpX. J. Mol. Biol. 336, 1211-1221 (2004).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Fernández, C., Hilty, C., Wider, G., Güntert, P. & Wüthrich, K. NMR Structure of the integral membrane protein OmpX. J. Mol. Biol. 336, 1211-1221 (2004).
PDB 1Q9G
PDB 1Q9G
BMRB 4936
BMRB 4936
FHA domain of mouse afadin 6.
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|FHA domain of mouse afadin 6.
PDB 1WLN
PDB 1WLN
Vanwetswinkel, S., Kriek, J., Andersen, G. R., Güntert, P., Dijk, J., Canters, G. W. & Siegal, G. Solution structure of the 162 residue C-terminal domain of the human elongation factor 1Bγ. J. Biol. Chem. 278, 43443-43451 (2003).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Vanwetswinkel, S., Kriek, J., Andersen, G. R., Güntert, P., Dijk, J., Canters, G. W. & Siegal, G. Solution structure of the 162 residue C-terminal domain of the human elongation factor 1Bγ. J. Biol. Chem. 278, 43443-43451 (2003).
PDB 1PBU NMR restraints
PDB 1PBU NMR restraints
BMRB 5628
BMRB 5628
Hilge, M., Siegal, G., Vuister, G. W., Güntert, P., Gloor, S. M. & Abrahams, J. P. ATP-induced conformational changes of the nucleotide-binding domain of Na,K-ATPase. Nat. Struct. Biol. 10, 468-474 (2003).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Hilge, M., Siegal, G., Vuister, G. W., Güntert, P., Gloor, S. M. & Abrahams, J. P. ATP-induced conformational changes of the nucleotide-binding domain of Na,K-ATPase. Nat. Struct. Biol. 10, 468-474 (2003).
PDB 1MO7 (free form) 1MO8 (ATP-bound form)
PDB 1MO7 (free form) 1MO8 (ATP-bound form)
BMRB 5577 (free form) 5576 (ATP-bound form)
BMRB 5577 (free form) 5576 (ATP-bound form)
Lührs, T., Riek, R., Güntert, P. & Wüthrich, K. NMR structure of the human doppel protein. J. Mol. Biol. 326, 1549-1557 (2003).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Lührs, T., Riek, R., Güntert, P. & Wüthrich, K. NMR structure of the human doppel protein. J. Mol. Biol. 326, 1549-1557 (2003).
PDB 1LG4 NMR restraints
PDB 1LG4 NMR restraints
BMRB 5145
BMRB 5145
Zahn, R., Güntert, P., von Schroetter, C. & Wüthrich, K. NMR structure of a human prion protein with two disulfide bridges. J. Mol. Biol. 326, 225-234 (2003).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Zahn, R., Güntert, P., von Schroetter, C. & Wüthrich, K. NMR structure of a human prion protein with two disulfide bridges. J. Mol. Biol. 326, 225-234 (2003).
PDB 1H0L NMR restraints
PDB 1H0L NMR restraints
BMRB 5378
BMRB 5378
Enggist, E., Thöny-Meyer, L., Güntert, P. & Pervushin, K. NMR structure of the heme chaperone CcmE reveals a novel functional motif. Structure 10, 1551-1557 (2002).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Enggist, E., Thöny-Meyer, L., Güntert, P. & Pervushin, K. NMR structure of the heme chaperone CcmE reveals a novel functional motif. Structure 10, 1551-1557 (2002).
PDB 1SR3 NMR restraints
PDB 1SR3 NMR restraints
Lee, D., Damberger, F. D., Peng, G., Horst, R., Güntert, P., Nikonova, L., Leal, W. S. & Wüthrich, K. NMR structure of the unliganded Bombyx mori pheromone-binding protein at physiological pH. FEBS Lett. 531, 314-318 (2002).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Lee, D., Damberger, F. D., Peng, G., Horst, R., Güntert, P., Nikonova, L., Leal, W. S. & Wüthrich, K. NMR structure of the unliganded Bombyx mori pheromone-binding protein at physiological pH. FEBS Lett. 531, 314-318 (2002).
PDB 1LS8
PDB 1LS8
Ellgaard, L., Bettendorff, P., Braun, D., Herrmann, T., Fiorito, F., Jelesarov, I., Herrmann, T., Güntert, P., Helenius, A. & Wüthrich, K. NMR structures of 36 and 73-residue fragments of the calreticulin P-domain. J. Mol. Biol. 322, 773-784 (2002).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Ellgaard, L., Bettendorff, P., Braun, D., Herrmann, T., Fiorito, F., Jelesarov, I., Herrmann, T., Güntert, P., Helenius, A. & Wüthrich, K. NMR structures of 36 and 73-residue fragments of the calreticulin P-domain. J. Mol. Biol. 322, 773-784 (2002).
PDB 1K9C NMR restraints (residues 189-261) 1K91 (residues 221-256)
PDB 1K9C NMR restraints (residues 189-261) 1K91 (residues 221-256)
BMRB 5204 (residues 189-261) 5205 (residues 221-256)
BMRB 5204 (residues 189-261) 5205 (residues 221-256)
Miura, T., Klaus, W., Ross, A., Güntert, P. & Senn, H. The NMR structure of the class I human ubiquitin-conjugating enzyme 2b. J. Biomol. NMR 22, 89-92 (2002).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Miura, T., Klaus, W., Ross, A., Güntert, P. & Senn, H. The NMR structure of the class I human ubiquitin-conjugating enzyme 2b. J. Biomol. NMR 22, 89-92 (2002).
PDB 1JAS NMR restraints
PDB 1JAS NMR restraints
BMRB 5038
BMRB 5038
Horst, R., Damberger, F., Luginbühl, P., Güntert, P., Peng, G., Nikonova, L., Leal, W. S. & Wüthrich, K. NMR structure reveals intramolecular regulation mechanism for pheromone binding and release. Proc. Natl. Acad. Sci. USA 98, 14374-14379 (2001).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Horst, R., Damberger, F., Luginbühl, P., Güntert, P., Peng, G., Nikonova, L., Leal, W. S. & Wüthrich, K. NMR structure reveals intramolecular regulation mechanism for pheromone binding and release. Proc. Natl. Acad. Sci. USA 98, 14374-14379 (2001).
PDB 1GM0 NMR restraints
PDB 1GM0 NMR restraints
BMRB 4849
BMRB 4849
Ellgaard, L., Riek, R., Herrmann, T., Güntert, P., Braun, D., Helenius, A. & Wüthrich, K. NMR structure of the calreticulin P-domain. Proc. Natl. Acad. Sci. USA 98, 3133-3138 (2001).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Ellgaard, L., Riek, R., Herrmann, T., Güntert, P., Braun, D., Helenius, A. & Wüthrich, K. NMR structure of the calreticulin P-domain. Proc. Natl. Acad. Sci. USA 98, 3133-3138 (2001).
PDB 1HHN
PDB 1HHN
BMRB 4878
BMRB 4878
Calzolai, L., Lysek, D. A., Güntert, P., von Schroetter, C., Riek, R., Zahn, R. & Wüthrich, K. NMR structures of three single-residue variants of the human prion protein. Proc. Natl. Acad. Sci. USA 97, 8340-8345 (2000).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Calzolai, L., Lysek, D. A., Güntert, P., von Schroetter, C., Riek, R., Zahn, R. & Wüthrich, K. NMR structures of three single-residue variants of the human prion protein. Proc. Natl. Acad. Sci. USA 97, 8340-8345 (2000).
PDB 1E1G NMR restraints (variant M166V) 1E1P NMR restraints (variant S170N) 1E1U NMR restraints (variant R220K)
PDB 1E1G NMR restraints (variant M166V) 1E1P NMR restraints (variant S170N) 1E1U NMR restraints (variant R220K)
BMRB 4736 (variant M166V) 4620 (variant R220K)
BMRB 4736 (variant M166V) 4620 (variant R220K)
Riek, R., Prêcheur, P., Wang, Y., Mackay, E. A., Wider, G., Güntert, P., Liu, A., Kägi, J. H. R. & Wüthrich, K. NMR structure of the sea urchin (Strongylocentrotus purpuratus) metallothionein MTA. J. Mol. Biol. 291, 417-428 (1999).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Riek, R., Prêcheur, P., Wang, Y., Mackay, E. A., Wider, G., Güntert, P., Liu, A., Kägi, J. H. R. & Wüthrich, K. NMR structure of the sea urchin (Strongylocentrotus purpuratus) metallothionein MTA. J. Mol. Biol. 291, 417-428 (1999).
PDB 1QJK NMR restraints (alpha domain) 1QJL NMR restraints (beta domain)
PDB 1QJK NMR restraints (alpha domain) 1QJL NMR restraints (beta domain)
BMRB 4363
BMRB 4363
Pellecchia, M., Güntert, P., Glockshuber, R. & Wüthrich, K. The NMR solution structure of the periplasmic chaperone FimC. Nature Struct. Biol. 5, 885-890 (1998).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Pellecchia, M., Güntert, P., Glockshuber, R. & Wüthrich, K. The NMR solution structure of the periplasmic chaperone FimC. Nature Struct. Biol. 5, 885-890 (1998).
PDB 1BF8
PDB 1BF8
BMRB 4070
BMRB 4070
Ottiger, M., Zerbe, O., Güntert, P. & Wüthrich, K. The NMR solution conformation of unligated human cyclophilin A. J. Mol. Biol. 272, 64-81 (1997).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Ottiger, M., Zerbe, O., Güntert, P. & Wüthrich, K. The NMR solution conformation of unligated human cyclophilin A. J. Mol. Biol. 272, 64-81 (1997).
PDB 1OCA NMR restraints
PDB 1OCA NMR restraints
Antuch, W., Güntert, P. & Wüthrich, K. Ancestral beta gamma-crystallin precursor structure in a yeast killer toxin, Nature Struct. Biol. 3, 662-665 (1996).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Antuch, W., Güntert, P. & Wüthrich, K. Ancestral beta gamma-crystallin precursor structure in a yeast killer toxin, Nature Struct. Biol. 3, 662-665 (1996).
PDB 1WKT NMR restraints
PDB 1WKT NMR restraints
BMRB 5255
BMRB 5255
Antuch, W., Güntert, P., Billeter, M., Hawthorne, T., Grossenbacher, H. & Wüthrich, K. NMR solution structure of the recombinant tick anticoagulant protein (rTAP), a factor Xa inhibitor from the tick Ornithodoros moubata. FEBS Lett. 352, 251-257 (1994).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Antuch, W., Güntert, P., Billeter, M., Hawthorne, T., Grossenbacher, H. & Wüthrich, K. NMR solution structure of the recombinant tick anticoagulant protein (rTAP), a factor Xa inhibitor from the tick Ornithodoros moubata. FEBS Lett. 352, 251-257 (1994).
PDB 1TAP
PDB 1TAP
Berndt, K. D., Güntert, P. & Wüthrich, K. The NMR solution structure of dendrotoxin K from the venom of Dendroaspis polylepis polylepis. J. Mol. Biol. 234, 735-750 (1993).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Berndt, K. D., Güntert, P. & Wüthrich, K. The NMR solution structure of dendrotoxin K from the venom of Dendroaspis polylepis polylepis. J. Mol. Biol. 234, 735-750 (1993).
PDB 1DTK NMR restraints
PDB 1DTK NMR restraints
Szyperski, T., Güntert, P., Stone, S. R. & Wüthrich, K. The NMR solution structure of hirudin(1-51) and comparison with corresponding three-dimensional structures determined using the complete 65-residue hirudin polypeptide chain. J. Mol. Biol. 228, 1193-1205 (1992).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Szyperski, T., Güntert, P., Stone, S. R. & Wüthrich, K. The NMR solution structure of hirudin(1-51) and comparison with corresponding three-dimensional structures determined using the complete 65-residue hirudin polypeptide chain. J. Mol. Biol. 228, 1193-1205 (1992).
PDB 1HIC NMR restraints
PDB 1HIC NMR restraints
Berndt, K. D., Güntert, P., Orbons, L. P. M. & Wüthrich, K. Determination of a high-quality NMR solution structure of the bovine pancreatic trypsin inhibitor (BPTI) and comparison with three crystal structures. J. Mol. Biol. 227, 757-775 (1992).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Berndt, K. D., Güntert, P., Orbons, L. P. M. & Wüthrich, K. Determination of a high-quality NMR solution structure of the bovine pancreatic trypsin inhibitor (BPTI) and comparison with three crystal structures. J. Mol. Biol. 227, 757-775 (1992).
PDB 1PIT NMR restraints
PDB 1PIT NMR restraints
Güntert, P., Qian, Y. Q., Otting, G., Müller, M., Gehring, W. J. & Wüthrich K. Structure determination of the Antp(C39->S) homeodomain from nuclear magnetic resonance data in solution using a novel strategy for the structure calculation with the programs DIANA, CALIBA, HABAS and GLOMSA. J. Mol. Biol. 217, 531-540 (1991).
|-
 
|[[image:2dwv asym r 250.jpg|120px]]
|Güntert, P., Qian, Y. Q., Otting, G., Müller, M., Gehring, W. J. & Wüthrich K. Structure determination of the Antp(C39->S) homeodomain from nuclear magnetic resonance data in solution using a novel strategy for the structure calculation with the programs DIANA, CALIBA, HABAS and GLOMSA. J. Mol. Biol. 217, 531-540 (1991).
PDB 2HOA
PDB 2HOA
|-
|}

Latest revision as of 13:53, 9 December 2008

NMR protein structures co-authored by P. Güntert.

2e29 asym r 250.jpg Ohnishi, S. Pääkkönen, K., Koshiba, S., Tochio, N., Sato, M., Kobayashi, N., Harada, T., Watanabe, S., Muto, Y., Güntert, P., Tanaka, A., Kigawa, T. & Yokoyama, S. Solution structure of the GUCT domain from human RNA helicase II/Guβ reveals the RRM fold, but implausible RNA interactions. Proteins 74, 133–144 (2009)

PDB 2E29

2jz4 asym r 250.jpg Takeda, M., Sugimori, N., Torizawa, T., Terauchi, T., Ono, A. M., Yagi, H., Yamaguchi, Y., Kato, K., Ikeya, T., Güntert, P., Aceti, D. J., Markley, J. L. & Kainosho, M. Structure of the putative 32 kDa myrosinase binding protein from Arabidopsis (At3g16450.1) as determined by the SAIL-NMR method. FEBS J. 275, 5873–5884 (2008)

PDB 2JZ4 NMR restraints BMRB 15607

2ba3 asym r 250.jpg Yoshida, H., Furuya, N., Lin, Y. J., Güntert, P., Komano, T. & Kainosho, M. Structural basis of the role of the NikA ribbon-helix-helix domain in initiating bacterial conjugation. J. Mol. Biol. 384, 690–701 (2008)

PDB 2BA3 BMRB 15784

2jns asym r 250.jpg Lin, Y. J., Umehara, T., Inoue, M., Saito, K., Kigawa, T., Jang, M. K., Ozato, K., Yokoyama, S., Padmanabhan, B., Güntert, P. Solution structure of the extraterminal domain of the bromodomain-containing protein BRD4. Protein Sci. 17, 2174–2179 (2008)

PDB 2JNS BMRB 15125

2ron asym r 250.jpg Koglin, A., Löhr, F., Bernhard, F., Rogov, V. R., Frueh, D. P., Strieter, E. R., Mofid, M. R., Güntert, P., Wagner, G., Walsh, C. T., Marahiel, M. A. & Dötsch, V. Structural basis for the selectivity of the external thioesterase of the surfactin-synthetase. Nature 454, 907–911 (2008)

PDB 2RON NMR restraints (SrfTEII)
PDB 2K2Q (complex of SrfTEII and H state TycC3–PCP)

1whv asym r 250.jpg Nagata, T., Suzuki, S., Endo, R., Shirouzu, M., Terada, T., Inoue, M., Kigawa, T, Güntert, P., Hayashizaki, Y., Muto, Y. & Yokoyama, S. The RRM domain of poly(A)-specific ribonuclease (PARN) has a non-canonical binding site for mRNA cap analog recognition. Nucl. Acids Res. 36, 4754–4767 (2008)

PDB 1WHV (free form)
PDB 2ROK (cap-bound form)

2jw8 asym r 250.jpg Takeda, M., Chang, C. K., Ikeya, T., Güntert, P., Chang, Y. H., Hsu, Y. L., Huang, T. H. & Kainosho, M. Solution structure of the C-terminal dimerization domain of SARS coronavirus nucleocapsid protein determined by the SAIL-NMR method. J. Mol. Biol. 380, 608–622 (2008)

PDB 2JW8 BMRB 15511

2rne asym r 250.jpg Kuwasako, K., Takahashi, M., Tochio, N., Abe, C., Tsuda, K., Inoue, M., Terada, T., Shirouzu, M., Kobayashi, N., Kigawa, T., Taguchi, S., Tanaka, A., Hayashizaki, Y., Güntert, P., Muto, Y. & Yokoyama, S. Solution structure of the second RNA recognition motif (RRM) domain of murine T cell intracellular antigen-1 (TIA-1) and its RNA recognition mode. Biochemistry 47, 6437–6450 (2008)

PDB 2RNE

2fho asym r 250.jpg Kuwasako, K., Dohmae, N., Inoue, M., Shirouzu, M., Taguchi, S., Güntert, P., Séraphin, B., Muto, Y. & Yokoyama, S. Complex assembly mechanism and an RNA-binding mode of the human p14-SF3b155 spliceosomal protein complex identified by NMR solution structure and functional analyses. Proteins 71, 1617–1636 (2008)

PDB 2FHO NMR restraints

2jo8 asym r 250.jpg Hwang, E., Ryu, K. S., Pääkkönen, K., Güntert, P., Cheong, H. K., Lim, D. S., Lee, J. O., Jeon, Y. H. & Cheong, C. Structural insight into dimeric interaction of the SARAH domains from Mst1 and RASSF family proteins in the apoptosis pathway. Proc. Natl. Acad. Sci. USA. 104, 9236–9241 (2007)

PDB 2JO8 NMR restraints

2dwv asym r 250.jpg Ohnishi, S. Güntert, P., Koshiba, S., Tomizawa, T., Akasaka, R., Tochio, N., Sato, M., Inoue, M., Harada, T., Watanabe, S., Tanaka, T., Shirouzu, M., Kigawa, T. & Yokoyama, S. Solution structure of an atypical WW domain in a novel β-clam-like dimeric form. FEBS Lett. 581, 462–468 (2007)

PDB 2DWV

2dwv asym r 250.jpg Kuwasako, K., He, F., Inoue, M., Tanaka, A., Sugano, S., Güntert, P., Muto, Y. & Yokoyama, S. Solution structures of the SURP domains and the subunit-assembly mechanism within the splicing factor SF3a complex in 17S U2 snRNP. Structure 14, 1677-1689 (2006).

PDB 2DT6 (SURP1)
PDB 2DT7 (SURP2-SF3a60)

2dwv asym r 250.jpg ENTH-VHS domain At3g16270(9-135) from Arabidopsis thaliana.
López-Méndez, B. & Güntert, P. Automated protein structure determination from NMR spectra. J. Am. Chem. Soc. 128, 13112-13122 (2006).

PDB 2DCP NMR restraints

Note: Automated structure determination with FLYA. Structure does not supersede the original deposition 1VDY.

2dwv asym r 250.jpg Rhodanese homology domain At3g16270(175-295) from Arabidopsis thaliana.

López-Méndez, B. & Güntert, P. Automated protein structure determination from NMR spectra. J. Am. Chem. Soc. 128, 13112-13122 (2006).

PDB 2DCQ NMR restraints

Note: Automated structure determination with FLYA. Structure does not supersede the original deposition 1VEE.

2dwv asym r 250.jpg Src homology domain 2 from the human feline sarcoma oncogene Fes.

López-Méndez, B. & Güntert, P. Automated protein structure determination from NMR spectra. J. Am. Chem. Soc. 128, 13112-13122 (2006).
PDB 2DCR NMR restraints
Note: Automated structure determination with FLYA. Structure does not supersede the original deposition 1WQU.

2dwv asym r 250.jpg NikA N-terminal fragment.

Yoshida, H., Furuya, N., Lin, Y. J., Güntert, P., Komano, T. & Kainosho, M. PDB 2BA3

2dwv asym r 250.jpg Jurt, S., Aemissegger, A., Güntert, P., Zerbe, O. & Hilvert, D. A photoswitchable miniprotein based on the sequence of avian pancreatic polypeptide. Angew. Chem. Int. Ed. 45, 6297-6300 (2006).

PDB 2H4B NMR restraints (cis-1-PP)
PDB 2H3S NMR restraints (cis-1-PP bound to DPC micelles)
PDB 2H3T NMR restraints (trans-1-PP bound to DPC micelles)

2dwv asym r 250.jpg Hamada, T., Ito, Y., Abe, T., Hayashi, F., Güntert, P., Inoue, M., Kigawa, T., Terada, T., Shirouzu, M., Yoshida, M., Tanaka, A., Sugano, S., Yokoyama, S. & Hirota, H. Solution structure of the antifreeze-like domain of human sialic acid synthase. Protein Sci. 15, 1010-1016 (2006).

PDB 1WVO NMR restraints

2dwv asym r 250.jpg Aachmann, F. L., Svanem, B. I. G., Güntert, P., Petersen, S. B., Valla, S. & Wimmer, R. NMR structure of the R-module - A parallel β-roll subunit from an Azotobacter vinelandii mannuronan C-5 epimerase. J. Biol. Chem. 281, 7350-7356 (2006).

PDB 2AGM NMR restraints

2dwv asym r 250.jpg Stereo-array isotope labeled (SAIL) maltodextrin-binding protein MBP.

Kainosho, M., Torizawa, T., Iwashita, Y., Terauchi, T., Ono, A. M. & Güntert, P. Optimal isotope labelling for NMR protein structure determinations. Nature 440, 52-57 (2006). PDB 2D21 BMRB 6807

2dwv asym r 250.jpg Stereo-array isotope labeled (SAIL) calmodulin.

Kainosho, M., Torizawa, T., Iwashita, Y., Terauchi, T., Ono, A. M. & Güntert, P. Optimal isotope labelling for NMR protein structure determinations. Nature 440, 52-27 (2006). PDB 1X02 BMRB 6541

2dwv asym r 250.jpg Li, H., Inoue, M., Yabuki, T., Aoki, M., Seki, E., Matsuda, T., Nunokawa, E., Motoda, Y., Kobayashi, A., Terada, T., Shirouzu, M., Koshiba, S., Lin, Y. J., Güntert, P., Suzuki, H., Hayashizaki, Y., Kigawa, T. & Yokoyama, S. Solution structure of the mouse enhancer of rudimentary protein reveals a novel fold. J. Biomol. NMR 32, 329-334 (2005).

PDB 1WWQ

2dwv asym r 250.jpg Scott, A., Pantoja-Uceda, D., Koshiba, S., Inoue, M., Kigawa, T., Terada, T., Shirouzu, M., Tanaka, A., Sugano, S., Yokoyama, S. & Güntert, P. Solution structure of the Src homology 2 domain from the human feline sarcoma oncogene Fes. J. Biomol. NMR 31, 357-361 (2005).

PDB 1WQU BMRB 6331

2dwv asym r 250.jpg Nameki, N., Tochio, N., Koshiba, S., Tochio, N., Inoue, M., Yabuki, T., Aoki, M., Seki, E., Matsuda, T., Saito, M., Ikari, M., Watanabe, M., Terada, T., Shirouzu, M., Yoshida, M., Hirota, H., Tanaka, A., Hayashizaki, Y., Güntert, P., Kigawa, T. & Yokoyama, S. Solution structure of the PWWP domain of the hepatoma-derived growth factor family. Prot. Sci. 14, 756-764 (2005).

PDB 1N27

2dwv asym r 250.jpg Calzolai, L., Lysek, D. A., Pérez, D. R., Güntert, P. & Wüthrich, K. Prion protein NMR structures of chicken, turtle and frog. Proc. Natl. Acad. Sci. USA 102, 651-655 (2005).

PDB 1U3M NMR restraints (chicken PrP(121-225)) 1U5L NMR restraints (turtle PrP(121-225)) 1XU0 NMR restraints (frog PrP(90-222)) BMRB 6269 (chicken PrP(128-242)) 6270 (chicken PrP(25-242)) 6282 (turtle PrP(121-225))

2dwv asym r 250.jpg Lysek, D. A., Schorn, C., Nivon, L. G., Esteve-Moya, V., Christen, B., Calzolai, L., von Schroetter, C., Fiorito, F., Herrmann, T., Güntert, P. & Wüthrich, K. Prion protein NMR structures of cat, dog, pig and sheep. Proc. Natl. Acad. Sci. USA 102, 640-645 (2005).

PDB 1XYJ NMR restraints (cat PrP(121-231)) 1XYK NMR restraints (dog PrP(121-231)) 1XYQ NMR restraints (pig PrP(121-231)) 1XYU NMR restraints (sheep PrP[H168](121-231)) 1Y2S NMR restraints (sheep PrP[R168](121-231)) BMRB 6377 (cat PrP(121-231)) 6378 (dog PrP(121-231)) 6380 (pig PrP(121-231)) 6381 (sheep PrP[H168](121-231)) 6403 (sheep PrP[H168](121-231))

2dwv asym r 250.jpg Pääkkönen, K., Tossavainen, H., Permi, P., Rakkolainen, H., Rauvala, H., Raulo, E., Kilpeläinen, I. & Güntert, P. Solution structures of the first and fourth TSR domains of F-spondin. Proteins 64, 665-672 (2006).

PDB 1SZL (TSR1) 1VEX (TSR4)

  • ENTH-VHS domain At3g16270 from Arabidopsis thaliana.

PDB 1VDY BMRB 5928

2dwv asym r 250.jpg Iwai, H., Forrer, P., Plückthun, A. & Güntert, P. NMR solution structure of the monomeric form of the bacteriophage λ capsid stabilizing protein gpD. J. Biomol. NMR 31, 351-356 (2005).

PDB 1VD0 BMRB 4936

2dwv asym r 250.jpg Pantoja-Uceda, D., López-Méndez, B., Koshiba, S., Inoue, M., Kigawa, T., Terada, T., Shirouzu, M., Tanaka, A., Seki, M., Shinozaki, K., Yokoyama, S. & Güntert, P. Solution structure of the rhodanese homology domain At4g01050(175-295) from Arabidopsis thaliana. Prot. Sci. 14, 224-230 (2005).

PDB 1VEE BMRB 5929

2dwv asym r 250.jpg Nameki, N., Yoneyama, M., Koshiba, S., Tochio, N., Inoue, M., Seki, E., Matsuda, T., Tomo, Y., Harada, T., Saito, K., Kobayashi, N., Yabuki, T., Aoki, M., Nunokawa, E., Matsuda, N., Sakagami, N., Terada, T., Shirouzu, M., Yoshida, M., Hirota, H., Osanai, T., Tanaka, A., Arakawa, T., Carninci, P., Kawai, J., Hayashizaki, Y., Kinoshita, K., Güntert, P., Kigawa, T. & Yokoyama, S. Solution structure of the RWD domain of the mouse GCN2 protein. Prot. Sci. 13, 2089-2100 (2004).

PDB 1UKX

2dwv asym r 250.jpg Fernández, C., Hilty, C., Wider, G., Güntert, P. & Wüthrich, K. NMR Structure of the integral membrane protein OmpX. J. Mol. Biol. 336, 1211-1221 (2004).

PDB 1Q9G BMRB 4936

2dwv asym r 250.jpg FHA domain of mouse afadin 6.

PDB 1WLN

2dwv asym r 250.jpg Vanwetswinkel, S., Kriek, J., Andersen, G. R., Güntert, P., Dijk, J., Canters, G. W. & Siegal, G. Solution structure of the 162 residue C-terminal domain of the human elongation factor 1Bγ. J. Biol. Chem. 278, 43443-43451 (2003).

PDB 1PBU NMR restraints BMRB 5628

2dwv asym r 250.jpg Hilge, M., Siegal, G., Vuister, G. W., Güntert, P., Gloor, S. M. & Abrahams, J. P. ATP-induced conformational changes of the nucleotide-binding domain of Na,K-ATPase. Nat. Struct. Biol. 10, 468-474 (2003).

PDB 1MO7 (free form) 1MO8 (ATP-bound form) BMRB 5577 (free form) 5576 (ATP-bound form)

2dwv asym r 250.jpg Lührs, T., Riek, R., Güntert, P. & Wüthrich, K. NMR structure of the human doppel protein. J. Mol. Biol. 326, 1549-1557 (2003).

PDB 1LG4 NMR restraints BMRB 5145

2dwv asym r 250.jpg Zahn, R., Güntert, P., von Schroetter, C. & Wüthrich, K. NMR structure of a human prion protein with two disulfide bridges. J. Mol. Biol. 326, 225-234 (2003).

PDB 1H0L NMR restraints BMRB 5378

2dwv asym r 250.jpg Enggist, E., Thöny-Meyer, L., Güntert, P. & Pervushin, K. NMR structure of the heme chaperone CcmE reveals a novel functional motif. Structure 10, 1551-1557 (2002).

PDB 1SR3 NMR restraints

2dwv asym r 250.jpg Lee, D., Damberger, F. D., Peng, G., Horst, R., Güntert, P., Nikonova, L., Leal, W. S. & Wüthrich, K. NMR structure of the unliganded Bombyx mori pheromone-binding protein at physiological pH. FEBS Lett. 531, 314-318 (2002).

PDB 1LS8

2dwv asym r 250.jpg Ellgaard, L., Bettendorff, P., Braun, D., Herrmann, T., Fiorito, F., Jelesarov, I., Herrmann, T., Güntert, P., Helenius, A. & Wüthrich, K. NMR structures of 36 and 73-residue fragments of the calreticulin P-domain. J. Mol. Biol. 322, 773-784 (2002).

PDB 1K9C NMR restraints (residues 189-261) 1K91 (residues 221-256) BMRB 5204 (residues 189-261) 5205 (residues 221-256)

2dwv asym r 250.jpg Miura, T., Klaus, W., Ross, A., Güntert, P. & Senn, H. The NMR structure of the class I human ubiquitin-conjugating enzyme 2b. J. Biomol. NMR 22, 89-92 (2002).

PDB 1JAS NMR restraints BMRB 5038

2dwv asym r 250.jpg Horst, R., Damberger, F., Luginbühl, P., Güntert, P., Peng, G., Nikonova, L., Leal, W. S. & Wüthrich, K. NMR structure reveals intramolecular regulation mechanism for pheromone binding and release. Proc. Natl. Acad. Sci. USA 98, 14374-14379 (2001).

PDB 1GM0 NMR restraints BMRB 4849

2dwv asym r 250.jpg Ellgaard, L., Riek, R., Herrmann, T., Güntert, P., Braun, D., Helenius, A. & Wüthrich, K. NMR structure of the calreticulin P-domain. Proc. Natl. Acad. Sci. USA 98, 3133-3138 (2001).

PDB 1HHN BMRB 4878

2dwv asym r 250.jpg Calzolai, L., Lysek, D. A., Güntert, P., von Schroetter, C., Riek, R., Zahn, R. & Wüthrich, K. NMR structures of three single-residue variants of the human prion protein. Proc. Natl. Acad. Sci. USA 97, 8340-8345 (2000).

PDB 1E1G NMR restraints (variant M166V) 1E1P NMR restraints (variant S170N) 1E1U NMR restraints (variant R220K) BMRB 4736 (variant M166V) 4620 (variant R220K)

2dwv asym r 250.jpg Riek, R., Prêcheur, P., Wang, Y., Mackay, E. A., Wider, G., Güntert, P., Liu, A., Kägi, J. H. R. & Wüthrich, K. NMR structure of the sea urchin (Strongylocentrotus purpuratus) metallothionein MTA. J. Mol. Biol. 291, 417-428 (1999).

PDB 1QJK NMR restraints (alpha domain) 1QJL NMR restraints (beta domain) BMRB 4363

2dwv asym r 250.jpg Pellecchia, M., Güntert, P., Glockshuber, R. & Wüthrich, K. The NMR solution structure of the periplasmic chaperone FimC. Nature Struct. Biol. 5, 885-890 (1998).

PDB 1BF8 BMRB 4070

2dwv asym r 250.jpg Ottiger, M., Zerbe, O., Güntert, P. & Wüthrich, K. The NMR solution conformation of unligated human cyclophilin A. J. Mol. Biol. 272, 64-81 (1997).

PDB 1OCA NMR restraints

2dwv asym r 250.jpg Antuch, W., Güntert, P. & Wüthrich, K. Ancestral beta gamma-crystallin precursor structure in a yeast killer toxin, Nature Struct. Biol. 3, 662-665 (1996).

PDB 1WKT NMR restraints BMRB 5255

2dwv asym r 250.jpg Antuch, W., Güntert, P., Billeter, M., Hawthorne, T., Grossenbacher, H. & Wüthrich, K. NMR solution structure of the recombinant tick anticoagulant protein (rTAP), a factor Xa inhibitor from the tick Ornithodoros moubata. FEBS Lett. 352, 251-257 (1994).

PDB 1TAP

2dwv asym r 250.jpg Berndt, K. D., Güntert, P. & Wüthrich, K. The NMR solution structure of dendrotoxin K from the venom of Dendroaspis polylepis polylepis. J. Mol. Biol. 234, 735-750 (1993).

PDB 1DTK NMR restraints

2dwv asym r 250.jpg Szyperski, T., Güntert, P., Stone, S. R. & Wüthrich, K. The NMR solution structure of hirudin(1-51) and comparison with corresponding three-dimensional structures determined using the complete 65-residue hirudin polypeptide chain. J. Mol. Biol. 228, 1193-1205 (1992).

PDB 1HIC NMR restraints

2dwv asym r 250.jpg Berndt, K. D., Güntert, P., Orbons, L. P. M. & Wüthrich, K. Determination of a high-quality NMR solution structure of the bovine pancreatic trypsin inhibitor (BPTI) and comparison with three crystal structures. J. Mol. Biol. 227, 757-775 (1992).

PDB 1PIT NMR restraints

2dwv asym r 250.jpg Güntert, P., Qian, Y. Q., Otting, G., Müller, M., Gehring, W. J. & Wüthrich K. Structure determination of the Antp(C39->S) homeodomain from nuclear magnetic resonance data in solution using a novel strategy for the structure calculation with the programs DIANA, CALIBA, HABAS and GLOMSA. J. Mol. Biol. 217, 531-540 (1991).

PDB 2HOA

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