Publications of M. Kainosho: Difference between revisions

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(New page: __NOTOC__ == Selected publications == * Kainosho, M., Torizawa, T., Iwashita, Y., Terauchi, T., Ono, A. M. & Güntert, P. Optimal isotope labeling for NMR protein structure determinations...)
 
 
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== All publications ==
== All publications ==


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==== In press/accepted ====


* He, F., Dang, W., Saito, K., Watanabe, S., Kobayashi, N., Güntert, P., Kigawa, T, Tanaka, A., Muto, Y. & Yokoyama, S. Solution structure of the cysteine-rich domain in Fn14, a member of the tumor necrosis factor receptor superfamily. Protein Sci.
==== 2008 ====


* He, F., Dang, W., Abe, C., Tsuda, K., Inoue, M., Watanabe, S., Kobayashi, N., Kigawa, T, Matsuda, T., Yabuki, T., Aoki, M., Seki, E., Harada, T., Tomabechi, Y., Terada, T., Shirouzu, M., Tanaka, A., Güntert, P., Muto, Y. & Yokoyama, S. Solution structure of the RNA binding domain in the human muscleblind-like protein 2. Protein Sci.
* Terauchi, T., Kobayashi, K., Okuma, K., Oba, M., Nishiyama, K. & Kainosho, M. Stereoselective synthesis of triply isotope-labeled Ser, Cys, and Ala: Amino acids for stereoarray isotope labeling technology. Org. Lett. 10, 2785-2787 (2008)


==== 2009 ====
* Takeda, M., Sugimori, N., Torizawa, T., Terauchi, T., Ono, A. M., Yagi, H., Yamaguchi, Y., Kato, K., Ikeya, T., Güntert, P., Aceti, D. J., Markley, J. L. & Kainosho, M. Structure of the putative 32 kDa myrosinase binding protein from Arabidopsis (At3g16450.1) as determined by the SAIL-NMR method. [http://dx.doi.org/10.1111/j.1742-4658.2008.06717.x FEBS J. 275, 5873–5884 (2008)]


* Schmucki, R., Yokoyama, S. & Güntert, P. Automated assignment of NMR chemical shifts using peak-particle dynamics simulation with the DYNASSIGN algorithm. [http://dx.doi.org/10.1007/s10858-008-9291-x J. Biomol. NMR. (2009)]
* Yoshida, H., Furuya, N., Lin, Y. J., Güntert, P., Komano, T. & Kainosho, M. Structural basis of the role of the NikA ribbon-helix-helix domain in initiating bacterial conjugation. [http://dx.doi.org/10.1016/j.jmb.2008.09.067 J. Mol. Biol. 384, 690–701 (2008)]


* Ohnishi, S. Pääkkönen, K., Koshiba, S., Tochio, N., Sato, M., Kobayashi, N., Harada, T., Watanabe, S., Muto, Y., Güntert, P., Tanaka, A., Kigawa, T. & Yokoyama, S. Solution structure of the GUCT domain from human RNA helicase II/Guβ reveals the RRM fold, but implausible RNA interactions. [http://dx.doi.org/10.1002/prot.22138 Proteins 74, 133–144 (2009)]
* Ohki, S. Y. & Kainosho, M. Stable Isotope Labeling Methods for Protein NMR Spectroscopy. [http://dx.doi.org/10.1016/j.pnmrs.2008.01.003 Prog. NMR Spectrosc. 53, 208-226 (2008)]


==== 2008 ====
* Takeda, M., Chang, C. K., Ikeya, T., Güntert, P., Chang, Y. H., Hsu, Y. L., Huang, T. H. & Kainosho, M. Solution structure of the C-terminal dimerization domain of SARS coronavirus nucleocapsid protein determined by the SAIL-NMR method. [http://dx.doi.org/10.1016/j.jmb.2007.11.093 J. Mol. Biol. 380, 608–622 (2008)]
 
==== 2007 ====


* Takeda, M., Sugimori, N., Torizawa, T., Terauchi, T., Ono, A. M., Yagi, H., Yamaguchi, Y., Kato, K., Ikeya, T., Güntert, P., Aceti, D. J., Markley, J. L. & Kainosho, M. Structure of the putative 32 kDa myrosinase binding protein from Arabidopsis (At3g16450.1) as determined by the SAIL-NMR method. [http://dx.doi.org/10.1111/j.1742-4658.2008.06717.x FEBS J. 275, 5873–5884 (2008)]
* Ikeya, T., Güntert, P. & Kainosho, M. NMRによる蛋白質構造決定の自動化. In 計算シミュレーションと分析データ解析, Maruzen, Tokyo, pp. 148–166 (2007) (in Japanese)


* Yoshida, H., Furuya, N., Lin, Y. J., Güntert, P., Komano, T. & Kainosho, M. Structural basis of the role of the NikA ribbon-helix-helix domain in initiating bacterial conjugation. [http://dx.doi.org/10.1016/j.jmb.2008.09.067 J. Mol. Biol. 384, 690–701 (2008)]
* Takeda, M., Ikeya, T., Güntert, P. & Kainosho, M. Automated structure determination of proteins with the SAIL-FLYA NMR method. [http://dx.doi.org/10.1038/nprot.2007.423 Nature Protocols 2, 2896–2902 (2007)]


* Lin, Y. J., Umehara, T., Inoue, M., Saito, K., Kigawa, T., Jang, M. K., Ozato, K., Yokoyama, S., Padmanabhan, B., Güntert, P. Solution structure of the extraterminal domain of the bromodomain-containing protein BRD4. [http://dx.doi.org/10.1110/ps.037580.108 Protein Sci. 17, 2174–2179 (2008)]
==== 2006 ====


* Güntert, P. Automated structure determination from NMR Spectra. [http://dx.doi.org/10.1007/s00249-008-0367-z Eur. Biophys. J. (2008)]
* Kainosho, M. & Güntert, P. 高分子量タンパク質のNMR構造決定-より速く、より正確に: タンパク質NMRの常識を覆す革新技術SAIL法. Stereo-array isotope labeling for faster and more accurate NMR structure determinations of high molecular weight proteins. Biotechnology J. (Tokyo) 6, 467–470 (2006) (in Japanese)


* Koglin, A., Löhr, F., Bernhard, F., Rogov, V. R., Frueh, D. P., Strieter, E. R., Mofid, M. R., Güntert, P., Wagner, G., Walsh, C. T., Marahiel, M. A. & Dötsch, V. Structural basis for the selectivity of the external thioesterase of the surfactin-synthetase. [http://dx.doi.org/10.1038/nature07161 Nature 454, 907–911 (2008)]
* Sasaki, T., Takahashi, S., Uchida, K., Funayama, S., Kainosho, M. & Nakagawa, A. Biosynthesis of quinolactacin A, a TNF production inhibitor. J. Antibiot. 59, 418-427 (2006).


* Nagata, T., Suzuki, S., Endo, R., Shirouzu, M., Terada, T., Inoue, M., Kigawa, T, Güntert, P., Hayashizaki, Y., Muto, Y. & Yokoyama, S. The RRM domain of poly(A)-specific ribonuclease (PARN) has a non-canonical binding site for mRNA cap analog recognition. [http://dx.doi.org/10.1093/nar/gkn458 Nucl. Acids Res. 36, 4754–4767 (2008)]
* Kainosho, M., Torizawa, T., Iwashita, Y., Terauchi, T., Ono, A. M. & Güntert, P. Optimal isotope labeling for NMR protein structure determinations. [http://dx.doi.org/10.1038/nature04525 Nature 440, 52–57 (2006)]


* Takeda, M., Chang, C. K., Ikeya, T., Güntert, P., Chang, Y. H., Hsu, Y. L., Huang, T. H. & Kainosho, M. Solution structure of the C-terminal dimerization domain of SARS coronavirus nucleocapsid protein determined by the SAIL-NMR method. [http://dx.doi.org/10.1016/j.jmb.2007.11.093 J. Mol. Biol. 380, 608–622 (2008)]
==== 2005 ====


* Reckel, S., Sobhanifar, S., Schneider, B., Junge, F., Schwarz, D., Durst, F., Löhr, F., Güntert, P., Bernhard, F. & Dötsch, V. Transmembrane segment enhanced labeling as a tool for the backbone assignment of helical membrane proteins. [http://dx.doi.org/10.1073/pnas.0710843105 Proc. Natl. Acad. Sci. USA 105, 8262–8267 (2008)]
* Uchida, K., Markley, J. L. & Kainosho, M. (2005). Carbon-13 NMR method for the detection of correlated hydrogen exchange at adjacent backbone peptide amides and its application to hydrogen exchange in five antiparallel beta strands within the hydrophobic core of Streptomyces subtilisin inhibitor (SSI). Biochemistry 44, 11811-11820.


* Kuwasako, K., Takahashi, M., Tochio, N., Abe, C., Tsuda, K., Inoue, M., Terada, T., Shirouzu, M., Kobayashi, N., Kigawa, T., Taguchi, S., Tanaka, A., Hayashizaki, Y., Güntert, P., Muto, Y. & Yokoyama, S. Solution structure of the second RNA recognition motif (RRM) domain of murine T cell intracellular antigen-1 (TIA-1) and its RNA recognition mode. [http://dx.doi.org/10.1021/bi7024723 Biochemistry 47, 6437–6450 (2008)]
* Torizawa, T., Ono, A. M., Terauchi, T. & Kainosho, M. (2005). NMR assignment methods for the aromatic ring resonances of phenylalanine and tyrosine residues in proteins. J. Am. Chem. Soc. 127, 12620-12626.


* Kuwasako, K., Dohmae, N., Inoue, M., Shirouzu, M., Taguchi, S., Güntert, P., Séraphin, B., Muto, Y. & Yokoyama, S. Complex assembly mechanism and an RNA-binding mode of the human p14-SF3b155 spliceosomal protein complex identified by NMR solution structure and functional analyses. [http://dx.doi.org/10.1002/prot.21839 Proteins 71, 1617–1636 (2008)]
* Chi, S. W., Lee, S. H., Kim, D. H., Ahn, M. J., Kim, J. S., Woo, J. Y., Torizawa, T., Kainosho, M. & Han, K. H. Structural details on mdm2-p53 interaction. J. Biol. Chem. 280, 38795-38802 (2005).


==== 2007 ====
==== 2004 ====
 
* Torizawa, T., Shimizu, M., Taoka, M., Miyano, H. & Kainosho, M. Efficient production of isotopically labeled proteins by cell-free synthesis: A practical protocol. J. Biomol. NMR 30, 311-325 (2004)


* Ikeya, T., Güntert, P. & Kainosho, M. NMRによる蛋白質構造決定の自動化. In 計算シミュレーションと分析データ解析, Maruzen, Tokyo, pp. 148–166 (2007) (in Japanese)
* Sugimori, N., Torizawa, T., Aceti, D. J., Thao, S., Markley, J. L. & Kainosho, M. Letter to the Editor: <sup>1</sup>H, <sup>13</sup>C and <sup>15</sup>N backbone assignment of a 32 kDa hypothetical protein from Arabidopsis thaliana, At3g16450.1. J. Biomol. NMR 30, 357-358 (2004)


* Takeda, M., Ikeya, T., Güntert, P. & Kainosho, M. Automated structure determination of proteins with the SAIL-FLYA NMR method. [http://dx.doi.org/10.1038/nprot.2007.423 Nature Protocols 2, 2896–2902 (2007)]
* Ohki, S., Eto, M., Takada, R., Shimizu, M., Brautigan, D. L. & Kainosho, M. Phosphorylation-induced conformational change responsible for the function of a myosin phosphatase inhibitor, CPI-17. [http://dx.doi.org/10.1016/j.stam.2004.01.008 Sci. Technol. Adv. Mater. 5, 383-386 (2004)]


* Kobayashi, N., Iwahara, J., Koshiba, S., Tomizawa, T., Tochio, N., Güntert, P., Kigawa, T. & Yokoyama, S. KUJIRA, a package of integrated modules for systematic and interactive analysis of NMR data directed to high-throughput NMR structure studies. [http://10.1007/s10858-007-9175-5 J. Biomol. NMR 39, 31–52 (2007)]
==== 2003 ====


* Hwang, E., Ryu, K. S., Pääkkönen, K., Güntert, P., Cheong, H. K., Lim, D. S., Lee, J. O., Jeon, Y. H. & Cheong, C. Structural insight into dimeric interaction of the SARAH domains from Mst1 and RASSF family proteins in the apoptosis pathway. [http://dx.doi.org/10.1073/pnas.0610716104 Proc. Natl. Acad. Sci. USA. 104, 9236–9241 (2007)]
* Tashiro, M., Okubo, S., Shimotakahara, S., Hatanaka, H., Yasuda, H., Kainosho, M., Yokoyama, S. & Shindo, H. NMR structure of ubiquitin-like domain in PARKIN: Gene product of familial Parkinson's disease. J. Biomol. NMR 25, 153-156 (2003)


* Ohnishi, S. Güntert, P., Koshiba, S., Tomizawa, T., Akasaka, R., Tochio, N., Sato, M., Inoue, M., Harada, T., Watanabe, S., Tanaka, T., Shirouzu, M., Kigawa, T. & Yokoyama, S. Solution structure of an atypical WW domain in a novel β-clam-like dimeric form. [http://dx.doi.org/10.1016/j.febslet.2007.01.008 FEBS Lett. 581, 462–468 (2007)]
* Ohki, S. Y., Eto, M., Shimizu, M., Takada, R., Brautigan, D. L. & Kainosho, M. Distinctive solution conformation of phosphatase inhibitor CPI-17 substituted with aspartate at the phosphorylation-site threohine residue. J. Mol. Biol. 326, 1539-1547 (2003)


==== 2006 ====
* Boisbouvier, J., Wu, Z. R., Ono, A., Kainosho, M. & Bax, A. Rotational diffusion tensor of nucleic acids from C-13 NMR relaxation. J. Biomol. NMR 27, 133-142 (2003)


* Jurt, S., Aemissegger, A., Güntert, P., Zerbe, O. & Hilvert, D. A photoswitchable miniprotein based on the sequence of avian pancreatic polypeptide. [http://dx.doi.org/10.1002/anie.200602084 Angew. Chem. Int. Ed. 45, 6297-6300 (2006)]
==== 2002 ====


* Kuwasako, K., He, F., Inoue, M., Tanaka, A., Sugano, S., Güntert, P., Muto, Y. & Yokoyama, S. Solution structures of the SURP domains and the subunit-assembly mechanism within the splicing factor SF3a complex in 17S U2 snRNP. [http://dx.doi.org/10.1016/j.str.2006.09.009 Structure 14, 1677–1689 (2006)]
* Torizawa, T., Terauchi, T. & Kainosho, M. Recent developments in NMR methods for structural biology. Seikagaku 74, 1279-1284 (2002)


* López-Méndez, B. & Güntert, P. Automated protein structure determination from NMR spectra. [http://dx.doi.org/10.1021/ja061136l J. Am. Chem. Soc. 128, 13112–13122 (2006)]
* Tanaka, Y., Kojima, C., Morita, E. H., Kasai, Y., Yamasaki, K., Ono, A., Kainosho, M. & Taira, K. Identification of the metal ion binding site on an RNA motif from hammerhead ribozymes using N-15 NMR spectroscopy. J. Am. Chem. Soc. 124, 4595-4601 (2002)


* Pääkkönen, K., Tossavainen, H., Permi, P., Rakkolainen, H., Rauvala, H., Raulo, E., Kilpeläinen, I. & Güntert, P. Solution structures of the first and fourth TSR domains of F-spondin. [http://dx.doi.org/10.1002/prot.21030 Proteins 64, 665–672 (2006)]
* Nomura, K. & Kainosho, M. Graphical analysis of the relative orientation of molecular alignment tensors for a protein dissolved in two different anisotropic media. J. Magn. Reson. 154, 146-153 (2002)


* Kainosho, M. & Güntert, P. 高分子量タンパク質のNMR構造決定-より速く、より正確に: タンパク質NMRの常識を覆す革新技術SAIL法. Stereo-array isotope labeling for faster and more accurate NMR structure determinations of high molecular weight proteins. Biotechnology J. (Tokyo) 6, 467–470 (2006) (in Japanese)
* Abu-Abed, M., Mal, T. K., Kainosho, M., MacLennan, D. H. & Ikura, M. Characterization of the ATP-binding domain of the sarco(endo)plasmic reticulum Ca2+-ATPase: Probing nucleotide binding by multidimensional NMR. Biochemistry 41, 1156-1164 (2002)


* Scott, A., López-Méndez, B. & Güntert, P. Fully automated structure determinations of the Fes SH2 domain using different sets of NMR spectra. [http://dx.doi.org/10.1002/mrc.1813 Magn. Reson. Chem. 44, S83–S88 (2006)]
==== 2001 ====


* Ikeya, T., Terauchi, T., Güntert, P., Kainosho, M. Evaluation of stereo-array isotope labeling (SAIL) patterns for automated structural analysis of proteins with CYANA. [http://dx.doi.org/10.1002/mrc.1815 Magn. Reson. Chem. 44, S152–S157 (2006)]
* Wu, Z. R., Ono, A., Kainosho, M. & Bax, A. H center dot center dot center dot N hydrogen bond lengths in double stranded DNA from internucleotide dipolar couplings. J. Biomol. NMR 19, 361-365 (2001)


* Hamada, T., Ito, Y., Abe, T., Hayashi, F., Güntert, P., Inoue, M., Kigawa, T., Terada, T., Shirouzu, M., Yoshida, M., Tanaka, A., Sugano, S., Yokoyama, S. & Hirota, H. Solution structure of the antifreeze-like domain of human sialic acid synthase. [http://dx.doi.org/10.1110/ps.051700406 Protein Sci. 15, 1010–1016 (2006)]
* Riek, R., Pervushin, K., Fernandez, C., Kainosho, M. & Wuthrich, K. [<sup>13</sup>C,<sup>13</sup>C]- and [<sup>13</sup>C,<sup>1</sup>H]-TROSY in a triple resonance experiment for ribose-base and intrabase correlations in nucleic acids. J. Am. Chem. Soc. 123, 658-664 (2001)


* Aachmann, F. L., Svanem, B. I. G., Güntert, P., Petersen, S. B., Valla, S. & Wimmer, R. NMR structure of the R-module - A parallel β-roll subunit from an ''Azotobacter vinelandii'' mannuronan C-5 epimerase. [http://dx.doi.org/10.1074/jbc.M510069200 J. Biol. Chem. 281, 7350–7356 (2006)]
* Ohki, S. Y., Eto, M., Kariya, E., Hayano, T., Hayashi, Y., Yazawa, M., Brautigan, D. & Kainosho, M. Solution NMR structure of the myosin phosphatase inhibitor protein CPI-17 shows phosphorylation-induced conformational changes responsible for activation. J. Mol. Biol. 314, 839-849 (2001)


* Kainosho, M., Torizawa, T., Iwashita, Y., Terauchi, T., Ono, A. M. & Güntert, P. Optimal isotope labeling for NMR protein structure determinations. [http://dx.doi.org/10.1038/nature04525 Nature 440, 52–57 (2006)]
* Ohki, S., Kariya, E., Hiraga, K., Wakamiya, A., Isobe, T., Oda, K. & Kainosho, M. (2001). NMR structure of Streptomyces killer toxin-like protein, SKLP: Further evidence for the wide distribution of single-domain beta gamma-crystallin superfamily proteins. J. Mol. Biol. 305, 109-120 (2001)


* Güntert, P. Symbolic NMR product operator calculations. [http://dx.doi.org/10.1002/qua.20754 Int. J. Quant. Chem. 106, 344–350 (2006)]
* Oba, M., Kobayashi, M., Oikawa, F., Nishiyama, K. & Kainosho, M. (2001). Synthesis of C-13/D doubly labeled L-leucines: Probes for conformational analysis of the leucine side-chain. J. Org. Chem. 66, 5919-5922 (2001)


==== 2005 ====
* Kurokawa, H., Osawa, M., Kurihara, H., Katayama, N., Tokumitsu, H., Swindells, M. B., Kainosho, M. & Ikura, M. (2001). Target-induced conformational adaptation of calmodulin revealed by the crystal structure of a complex with nematode Ca2+/calmodulin-dependent kinase kinase peptide. J. Mol. Biol. 312, 59-68 (2001)


* Li, H., Inoue, M., Yabuki, T., Aoki, M., Seki, E., Matsuda, T., Nunokawa, E., Motoda, Y., Kobayashi, A., Terada, T., Shirouzu, M., Koshiba, S., Lin, Y. J., Güntert, P., Suzuki, H., Hayashizaki, Y., Kigawa, T. & Yokoyama, S. Solution structure of the mouse enhancer of rudimentary protein reveals a novel fold. [http://dx.doi.org/10.1007/s10858-005-7959-z J. Biomol. NMR 32, 329–334 (2005)]
* Kojima, C., Ulyanov, N. B., Kainosho, M. & James, T. L. Slow motion in the CAA center dot TTG sequence of a DNA decamer duplex studied by NMR. Biochemistry 40, 7239-7246 (2001)


* Lin, Y. J. & Güntert, P. 利用核磁共振光譜自動化決定蛋白質在水溶液中的三度空間結構. Automated 3D structure determination of proteins in solution using NMR spectra. Instruments Today 146, 87–93 (2005) (in Chinese)
* Kojima, C., Ono, A. M., Ono, A. & Kainosho, M. (2001). Solid-phase synthesis of selectively labeled DNA: Applications for multidimensional nuclear magnetic resonance spectroscopy. In Nuclear Magnetic Resonance of Biologica Macromolecules, Pt A, Vol. 338, pp. 261-283.


* Iwai, H., Forrer, P., Plückthun, A. & Güntert, P. NMR solution structure of the monomeric form of the bacteriophage λ capsid stabilizing protein gpD. [http://dx.doi.org/10.1007/s10858-005-0945-7 J. Biomol. NMR. 31, 351–356 (2005)]
* Kojima, C., Kawashima, E., Sekine, T., Ishido, Y., Ono, A., Kainosho, M. & Kyogoku, Y. Sugar conformation of a stereospecific 2 '-R or 2 '-S deuterium-labeled DNA decamer studied with proton-proton J coupling constants. J. Biomol. NMR 19, 19-31 (2001)


* Scott, A., Pantoja-Uceda, D., Koshiba, S., Inoue, M., Kigawa, T., Terada, T., Shirouzu, M., Tanaka, A., Sugano, S., Yokoyama, S. & Güntert, P. Solution structure of the Src homology 2 domain from the human feline sarcoma oncogene Fes. [http://dx.doi.org/10.1007/s10858-005-0946-6 J. Biomol. NMR. 31, 357–361 (2005)]
* Ishikawa, R., Kojima, C., Ono, A. & Kainosho, M. Developing model systems for the NMR study of substituent effects on the N-H center dot center dot center dot N hydrogen bond in duplex DNA. Magn Reson Chem 39, S159-S165 (2001)


* Nederveen, A. J., Doreleijers, J. F., Vranken, W., Miller, Z., Spronk, C. A. E. M., Nabuurs, S. B., Güntert, P., Livny, M., Markley, J. L., Nilges, M., Ulrich, E. L., Kaptein, R. & Bonvin, A. M. J. J. RECOORD: a REcalculated COORdinates Database of 500+ proteins from the PDB using restraints from the BioMagResBank. Proteins 59, 662–672 (2005)
* Detken, A., Hardy, E. H., Ernst, M., Kainosho, M., Kawakami, T., Aimoto, S. & Meier, B. H. Methods for sequential resonance assignment in solid, uniformly C-13, N-15 labelled peptides: Quantification and application to antamanide. J. Biomol. NMR 20, 203-221 (2001)


* Nameki, N., Tochio, N., Koshiba, S., Inoue, M., Yabuki, T., Aoki, M., Seki, E., Matsuda, T., Fujikura, Y., Saito, M., Ikari, M., Watanabe, M., Terada, T., Shirouzu, M., Yoshida, M., Hirota, H., Tanaka, A., Hayashizaki, Y., Güntert, P., Kigawa, T. & Yokoyama, S. Solution structure of the PWWP domain of the hepatoma-derived growth factor family. Protein Sci. 14, 756–764 (2005)
* Bae, S. H., Cheong, H. K., Lee, J. H., Cheong, C., Kainosho, M. & Choi, B. S. Structural features of an influenza virus promoter and their implications for viral RNA synthesis. Proc. Natl. Acad. Sci. USA 98, 10602-10607 (2001)


* Lysek, D. A., Schorn, C., Nivon, L. G., Esteve-Moya, V., Christen, B., Calzolai, L., von Schroetter, C., Fiorito, F., Herrmann, T., Güntert, P. & Wüthrich, K. Prion protein NMR structures of cat, dog, pig and sheep. Proc. Natl. Acad. Sci. USA 102, 640–645 (2005)
==== 2000 ====


* Calzolai, L., Lysek, D. A., Pérez, D. R., Güntert, P. & Wüthrich, K. Prion protein NMR structures of chicken, turtle and frog. Proc. Natl. Acad. Sci. USA 102, 651–655 (2005)
36. Yokoyama, S., Matsuo, Y., Hirota, H., Kigawa, T., Shirouzu, M., Kuroda, Y., Kurumizaka, H., Kawaguchi, S., Ito, Y., Shibata, T., Kainosho, M., Nishimura, Y., Inoue, Y. & Kuramitsu, S. (2000). Structural genomics projects in Japan. Prog Biophys Mol Bio 73, 363-376.


* Pantoja-Uceda, D., López-Méndez, B., Koshiba, S., Inoue, M., Kigawa, T., Terada, T., Shirouzu, M., Tanaka, A., Seki, M., Shinozaki, K., Yokoyama, S. & Güntert, P. Solution structure of the rhodanese homology domain At4g01050(175–295) from Arabidopsis thaliana. Protein Sci. 14, 224–230 (2005)
37. Utsunomiya-Tate, N., Kubo, K., Tate, S., Kainosho, M., Katayama, E., Nakajima, K. & Mikoshiba, K. (2000). Reelin molecules assemble together to form a large protein complex, which is inhibited by the function-blocking CR-50 antibody. Proc. Natl. Acad. Sci. USA 97, 9729-9734.


==== 2004 ====
38. Tjandra, N., Tate, S., Ono, A., Kainosho, M. & Bax, A. (2000). The NMR structure of a DNA dodecamer in an aqueous dilute liquid crystalline phase. J. Am. Chem. Soc. 122, 6190-6200.


* Scott, A., Pantoja-Uceda, D., Koshiba, S., Inoue, M., Kigawa, T., Terada, T., Shirouzu, M., Tanaka, A., Sugano, S., Yokoyama, S. & Güntert, P. NMR assignment of the SH2 domain of the human feline sarcoma oncogene FES. [http://dx.doi.org/10.1007/s10858-004-5432-z J. Biomol. NMR 30, 463–464 (2004)]
39. Tanaka, Y., Kojima, C., Yamazaki, T., Kodama, T. S., Yasuno, K., Miyashita, S., Ono, A., Kainosho, M. & Kyogoku, Y. (2000). Solution structure of an RNA duplex including a C-U base pair. Biochemistry 39, 7074-7080.


* Nameki, N., Yoneyama, M., Koshiba, S., Tochio, N., Inoue, M., Seki, E., Matsuda, T., Tomo, Y., Harada, T., Saito, K., Kobayashi, N., Yabuki, T., Aoki, M., Nunokawa, E., Matsuda, N., Sakagami, N., Terada, T., Shirouzu, M., Yoshida, M., Hirota, H., Osanai, T., Tanaka, A., Arakawa, T., Carninci, P., Kawai, J., Hayashizaki, Y., Kinoshita, K., Güntert, P., Kigawa, T. & Yokoyama, S. Solution structure of the RWD domain of the mouse GCN2 protein. Protein Sci. 13, 2089–2100 (2004)
40. Pervushin, K., Fernandez, C., Riek, R., Ono, A., Kainosho, M. & Wuthrich, K. (2000). Determination of (h2)J(NN) and (h1)J(HN) coupling constants across Watson-Crick base pairs in the Antennapedia homeodomain-DNA complex using TROSY. J. Biomol. NMR 16, 39-46.


* Güntert, P. Automated NMR structure calculation with CYANA. Meth. Mol. Biol. 278, 353–378 (2004)
41. Nomura, K., Takegoshi, K., Terao, T., Uchida, K. & Kainosho, M. (2000). Three-dimensional structure determination of a uniformly labeled molecule by frequency-selective dipolar recoupling under magic-angle spinning. J. Biomol. NMR 17, 111-123.


* López-Méndez, B., Pantoja-Uceda, D., Tomizawa, T., Koshiba, S., Kigawa, T., Shirouzu, M., Terada, T., Inoue, M., Yabuki, T., Aoki, M., Seki, E., Matsuda, T., Hirota, H., Yoshida, M., Tanaka, A., Osanai, T., Seki, M., Shinozaki, K., Yokoyama, S. & Güntert, P. NMR assignment of the hypothetical ENTH-VHS domain At3g16270 from ''Arabidopsis thaliana''. J. Biomol. NMR 29, 205–206 (2004)
42. Miyake, Y., Minami, T., Kikuchi, K., Kainosho, M. & Achiba, Y. (2000).


* Pantoja-Uceda, D., López-Méndez, B., Koshiba, S., Kigawa, T., Shirouzu, M., Terada, T., Inoue, M., Yabuki, T., Aoki, M., Seki, E., Matsuda, T., Hirota, H., Yoshida, M., Tanaka, A., Osanai, T., Seki, M., Shinozaki, K., Yokoyama, S. & Güntert, P. NMR assignment of the hypothetical rhodanese domain At4g01050 from ''Arabidopsis thaliana.'' [http://dx.doi.org/10.1023/B:JNMR.0000019241.66789.c3 J. Biomol. NMR 29, 207–208 (2004)]
43. Kojima, C., Ono, A. & Kainosho, M. (2000). Studies of physicochemical properties of N-H center dot center dot center dot N hydrogen bonds in DNA, using selective N-15-labeling and direct N-15 1D NMR. J. Biomol. NMR 18, 269-277.


* Fernández, C., Hilty, C., Wider, G., Güntert, P. & Wüthrich, K. NMR structure of the integral membrane protein OmpX. J. Mol. Biol. 336, 1211–1221 (2004)
44. Kojima, C. & Kainosho, M. (2000). Simple suppression of spurious peaks in TROSY experiments. J. Magn. Reson. 143, 417-422.


* Iwai, H., Forrer, P., Plückthun, A. & Güntert, P. Assignments of <sup>1</sup>H and <sup>15</sup>N resonances of the bacteriophage λ capsid stabilizing protein gpD. [http://dx.doi.org/10.1023/B:JNMR.0000012844.21707.8c J. Biomol. NMR 28, 89–90 (2004)]
45. Kariya, E., Ohki, S., Hayano, T. & Kainosho, M. (2000). Backbone H-1, C-13, and N-15 resonance assignments of an 18.2 kDa protein, E-coli peptidyl-prolyl cis-trans isomerase b (EPPIb). J. Biomol. NMR 18, 75-76.


==== 2003 ====
==== 1999 ====


* Güntert, P. Automated NMR protein structure calculation. Prog. NMR Spectrosc. 43, 105–125 (2003)
46. Szyperski, T., Fernandez, C., Ono, A., Wuthrich, K. & Kainosho, M. (1999). The 2D {P-31} spin-echo-difference constant-time [C-13, H-1]-HMQC experiment for simultaneous determination of (3)J(H3 ' P) and (3)J(C4 ' P) in C-13-labeled nucleic acids and their protein complexes. J. Magn. Reson. 140, 491-494.


* Vanwetswinkel, S., Kriek, J., Andersen, G. R., Güntert, P., Dijk, P., Canters, G. W. & Siegal, G. Solution structure of the 162 residue C-terminal domain of human elongation factor 1Bγ. J. Biol. Chem. 278, 43443–43451 (2003)
47. Sasakawa, H., Tamura, A., Akasaka, K., Taguchi, S., Miyake, Y. & Kainosho, M. (1999). Backbone H-1, C-13, and N-15 resonance assignments of Streptomyces subtilisin inhibitor. J. Biomol. NMR 14, 285-286.


* Jee, J. G. & Güntert, P. Influence of the completeness of chemical shift assignments on NMR structures obtained with automated NOE assignment. J. Struct. Funct. Genom. 4, 179–189 (2003)
48. Oba, M., Miyakawa, A., Nishiyama, K., Terauchi, T. & Kainosho, M. (1999). Stereodivergent synthesis of (2S,3S,4R,5R)- and (2S,3S,4R,5S)-[3,4,5-D-3]proline depending on the substituent of the gamma-lactam ring. J. Org. Chem. 64, 9275-9278.


* Hilge, M., Siegal, G., Vuister, G. W., Güntert, P., Gloor, S. M. & Abrahams, J. P. ATP-induced conformational changes of the nucleotide-binding domain of Na,K-ATPase. Nat. Struct. Biol. 10, 468–474 (2003)
49. Nomura, K., Takegoshi, K., Terao, T., Uchida, K. & Kainosho, M. (1999). Determination of the complete structure of a uniformly labeled molecule by rotational resonance solid-state NMR in the tilted rotating frame. J. Am. Chem. Soc. 121, 4064-4065.


* Lührs, T., Riek, R., Güntert, P. & Wüthrich, K. NMR structure of the human doppel protein. J. Mol. Biol. 326, 1549–1557 (2003)
50. Mine, S., Tate, S., Ueda, T., Kainosho, M. & Imoto, T. (1999). Analysis of the relationship between enzyme activity and its internal motion using nuclear magnetic resonance: N-15 relaxation studies of wild-type and mutant lysozyme. J. Mol. Biol. 286, 1547-1565.


* Zahn, R., Güntert, P. & Wüthrich, K. NMR structure of a variant human prion protein with two disulfide bonds. J. Mol. Biol. 326, 225–234 (2003).  
51. Kojima, C., Ono, A., Kainosho, M. & James, T. L. (1999). Quantitative measurement of transverse and longitudinal cross-correlation between C-13-H-1 dipolar interaction and C-13 chemical shift anisotropy: Application to a C-13-labeled DNA duplex. J. Magn. Reson. 136, 169-175.


==== 2002 ====
52. Kishimoto, Y., Eckerle, P., Miyatake, T., Kainosho, M., Ono, A., Ikariya, T. & Noyori, R. (1999). Well-controlled polymerization of phenylacetylenes with organorhodium(I) complexes: Mechanism and structure of the polyenes. J. Am. Chem. Soc. 121, 12035-12044.


* Herrmann, T., Güntert, P. & Wüthrich, K. Protein NMR structure determination with automated NOE-identification in the NOESY spectra using the new software ATNOS. [http://dx.doi.org/10.1023/A:1021614115432 J. Biomol. NMR 24, 171–189 (2002)]
53. Hiraga, K., Seeram, S. S., Tate, S., Tanaka, N., Kainosho, M. & Oda, K. (1999). Mutational analysis of the reactive site loop of Streptomyces metalloproteinase inhibitor, SMPI. Journal of Biochemistry 125, 202-209.


* Güntert, P. Structure calculation using automated techniques. Meth. Principles Med. Chem. 16, 39–66 (2002)
54. Fernandez, C., Szyperski, T., Billeter, M., Ono, A., Iwai, H., Kainosho, M. & Wuthrich, K. (1999). Conformational changes of the BS2 operator DNA upon complex formation with the Antennapedia homeodomain studied by NMR with C-13/N-15-labeled DNA. J. Mol. Biol. 292, 609-617.


* Enggist, E., Thöny-Meyer, L., Güntert, P. & Pervushin, K. NMR structure of the heme chaperone CcmE reveals a new functional motif. Structure 10, 1551–1557 (2002)
==== 1998 ====
* Lee, D., Damberger, F. D., Peng, G., Horst, R., Güntert, P., Nikonova, L., Leal, W. S. & Wüthrich, K. NMR structure of the unliganded ''Bombyx mori'' pheromone-binding protein at physiological pH. FEBS Lett. 531, 314–318 (2002)


* Ellgaard, L., Bettendorff, P., Braun, D., Herrmann, T., Fiorito, F., Jelesarov, I., Güntert, P., Helenius, A. & Wüthrich, K. NMR Structures of 36 and 73-residue fragments of the calreticulin P-domain. J. Mol. Biol. 322, 773–784 (2002)
55. Yabuki, T., Kigawa, T., Dohmae, N., Takio, K., Terada, T., Ito, Y., Laue, E. D., Cooper, J. A., Kainosho, M. & Yokoyama, S. (1998). Dual amino acid-selective and site-directed stable-isotope labeling of the human c-Ha-Ras protein by cell-free synthesis. J. Biomol. NMR 11, 295-306.
* Herrmann, T., Güntert, P. & Wüthrich, K. Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA. J. Mol. Biol. 319, 209–227 (2002)


* Miura, T., Klaus, W., Ross, A., Güntert, P., Senn, H. The NMR structure of the class I human ubiquitin-conjugating enzyme 2b. [http://dx.doi.org/10.1023/A:1013807519703 J. Biomol. NMR 22, 89–92 (2002)]
56. Tate, S., Ohno, A., Seeram, S. S., Hiraga, K., Oda, K. & Kainosho, M. (1998). Elucidation of the mode of interaction of thermolysin with a proteinaceous metalloproteinase inhibitor, SMPI, based on a model complex structure and a structural dynamics analysis. J. Mol. Biol. 282, 435-446.


==== 2001 ====
57. Tanaka, T., Saha, S. K., Tomomori, C., Ishima, R., Liu, D. J., Tong, K. I., Park, H., Dutta, R., Qin, L., Swindells, M. B., Yamazaki, T., Ono, A. M., Kainosho, M., Inouye, M. & Ikura, M. (1998). NMR structure of the histidine kinase domain of the E-coli osmosensor EnvZ. Nature 396, 88-92.


* Horst, R., Damberger, F., Luginbühl, P., Güntert, P., Peng, G., Nikonova, L., Leal, W. S. & Wüthrich, K. NMR structure reveals intramolecular regulation mechanism for phero¬mone binding and release. Proc. Natl. Acad. Sci. USA 98, 14374–14379 (2001)
58. Tanaka, T., Ames, J. B., Kainosho, M., Stryer, L. & Ikura, M. (1998). Differential isotope labeling strategy for determining the structure of myristoylated recoverin by NMR spectroscopy. J. Biomol. NMR 11, 135-152.


* Riek, R., Güntert, P., Döbeli, H., Wipf, B. & Wüthrich, K. NMR studies in aqueous solution fail to identify significant conformational differences between the monomeric forms of two Alzheimer peptides with widely different plaque-competence, Aβ(1–40)<sup>ox</sup> and Aβ(1– 42)<sup>ox</sup>. Eur. J. Biochem. 268, 5930–5936 (2001)
59. Szyperski, T., Fernandez, C., Ono, A., Kainosho, M. & Wuthrich, K. (1998). Measurement of deoxyribose (3)J(HH) scalar couplings reveals protein binding-induced changes in the sugar puckers of the DNA. J. Am. Chem. Soc. 120, 821-822.


* Güntert, P. & Wüthrich, K. Sampling of conformation space in torsion angle dynamics calculations. Comp. Phys. Commun. 138, 155–169 (2001)
60. Pervushin, K., Ono, A., Fernandez, C., Szyperski, T., Kainosho, M. & Wuthrich, K. (1998). NMR scaler couplings across Watson-Crick base pair hydrogen bonds in DNA observed by transverse relaxation optimized spectroscopy. Proc. Natl. Acad. Sci. USA 95, 14147-14151.


* Ellgaard, L., Riek, R., Herrmann, T., Güntert, P., Braun, D., Helenius, A. & Wüthrich, K. NMR structure of the calreticulin P-domain. Proc. Natl. Acad. Sci. USA 98, 3133–3138 (2001)
61. Oogo, Y., Ono, A. & Kainosho, M. (1998). Synthesis of [5 '-H-2(1)]-nucleosides with defined (5 ' S)/(5 ' R)-ratios. Tetrahedron Lett. 39, 2873-2876.


==== 2000 ====
62. Ono, A., Shiina, T. & Kainosho, M. (1998). Systematic synthesis of specifically C-13/H-2-labeled nucleosides from [ul-C-13(6)]-D-Glucose. Tetrahedron Lett. 39, 2793-2796.


* Güntert, P., Salzmann, M., Braun, D. & Wüthrich, K. Sequence-specific NMR assignments of proteins by global fragment mapping with the program MAPPER. [http://dx.doi.org/10.1023/A:1008318805889 J. Biomol. NMR 18, 129–137 (2000)]
63. Ohno, A., Tate, S., Seeram, S. S., Hiraga, K., Swindells, M. B., Oda, K. & Kainosho, M. (1998). NMR structure of the Streptomyces metalloproteinase inhibitor, SMPI, isolated from Streptomyces nigrescens TK-23: Another example of an ancestral beta gamma-crystallin precursor structure. J. Mol. Biol. 282, 421-433.


* Calzolai, L., Lysek, D. A., Güntert, P., von Schroetter, C., Riek, R., Zahn, R. & Wüthrich, K. NMR structures of three single-residue variants of the human prion protein. Proc. Natl. Acad. Sci. USA 97, 8340–8345 (2000)
64. Kojima, C., Ono, A., Kainosho, M. & James, T. L. (1998). DNA duplex dynamics: NMR relaxation studies of a decamer with uniformly C-13-labeled purine nucleotides. J. Magn. Reson. 135, 310-333.


* Koradi, R., Billeter, M. & Güntert, P. Point-centered domain decomposition for parallel molecular dynamics simulation. Comp. Phys. Commun. 124, 139–147 (2000)
65. Kojima, C., Kawashima, E., Toyama, K., Ohshima, K., Ishido, Y., Kainosho, M. & Kyogoku, Y. (1998). Stereospecific assignment of H5 ' and H5 '' in a (5 ' R)-/(5 ' S)-deuterium-labeled DNA decamer for (3)J(HH) determination and unambiguous NOE assignments. J. Biomol. NMR 11, 103-109.


==== 1999 ====
66. Ishii, Y., Hirao, K., Terao, T., Terauchi, T., Oba, M., Nishiyama, K. & Kainosho, M. (1998). Determination of peptide phi angles in solids by relayed anisotropy correlation NMR. Solid State Nuclear Magnetic Resonance 11, 169-175.


* Riek, R., Prêcheur, B., Wang, Y., Wider, G., Güntert, P., Liu, A., Kägi, J. H. R. & Wüthrich, K. NMR structure of the sea urchin (''strongylocentrotus purpuratus'') metallothionein MTA. J. Mol. Biol. 291, 417–428 (1999)
67. Fernandez, C., Szyperski, T., Ono, A., Iwai, H., Tate, S., Kainosho, M. & Wuthrich, K. (1998). NMR with C-13, N-15-doubly-labeled DNA: The Antennapedia homeodomain complex with a 14-mer DNA duplex. J. Biomol. NMR 12, 25-37.


* Güntert, P. Megahertz and Gigaflops: NMR protein structure determination and high- performance computing. Speedup 12, 47–52 (1999)
68. Akashi, S., Takio, K., Matsui, H., Tate, S. & Kainosho, M. (1998). Collision-induced dissociation spectra obtained by Fourier transform ion cyclotron resonance mass spectrometry using a C-13, N-15-doubly depleted protein. Anal Chem 70, 3333-3336.


==== 1998 ====
==== 1997 ====


* Güntert, P., Billeter, M., Ohlenschläger, O., Brown, L. & Wüthrich, K. Conformational analysis of protein and nucleic acid fragments with the new grid search algorithm FOUND. [http://dx.doi.org/10.1023/A:1008391403193 J. Biomol. NMR 12, 543–548 (1998)]
69. Szyperski, T., Ono, A., Fernandez, C., Iwai, H., Tate, S., Wuthrich, K. & Kainosho, M. (1997). Measurement of (3)J(C2'P) scalar couplings in a 17 kDa protein complex with C-13,N-15-Labeled DNA distinguishes the B-I and B-II phosphate conformations of the DNA. J. Am. Chem. Soc. 119, 9901-9902.


* Banci, L., Bertini, I., Cremonini, M. A., Gori-Savellini, G., Luchinat, C., Wüthrich, K. & Güntert, P. PSEUDYANA for NMR structure calculation of paramagnetic metalloproteins using torsion angle molecular dynamics. [http://dx.doi.org/10.1023/A:1008388614638 J. Biomol. NMR 12, 553–557 (1998)]
70. Ono, A. M., Ono, A. & Kainosho, M. (1997). Synthesis of (5'S)-[5'-H-2(1);1',2',3',4',5'-C-13(5)]-thymidine via stereoselective deuteration of a 5-oxoribose derivative. Tetrahedron Lett. 38, 395-398.


* Koradi, R., Billeter, M., Engeli, M., Güntert, P. & Wüthrich, K. Automated peak picking and peak integration in macromolecular NMR spectra using AUTOPSY. [http://dx.doi.org/10.1006/jmre.1998.1570 J. Magn. Reson.135, 288-297 (1998)]
71. Kim, I., Muto, Y., Inoue, M., Watanabe, S., Kitamura, A., Yokoyama, S., Hosono, K., Takaku, H., Ono, A., Kainosho, M., Sakamoto, H. & Shimura, Y. (1997). NMR analysis of the hydrogen bonding interactions of the RNA-binding domains of the Drosophila Sex-lethal protein with target RNA fragments with site-specific [3-N-15]uridine substitutions. Nucleic Acids Res. 25, 1565-1569.


* Güntert, P. Structure calculation of biological macromolecules from NMR data. Q. Rev. Biophys. 31, 145–237 (1998)
72. Kawashima, E., Toyama, K., Ohshima, K., Kainosho, M., Kyogoku, Y. & Ishido, Y. (1997). Novel approach to diastereoselective synthesis of 2'-deoxy[5'-H-2(1)]ribonucleoside derivatives by reduction of the corresponding 5'-O-acetyl-2'-deoxy-5'-phenylselenoribonucleoside derivatives with a (Bu3SnH)-H-2-Et3B system. Chirality 9, 435-442.


* Pellecchia, M., Güntert, P., Glockshuber, R. & Wüthrich, K. The NMR solution structure of the periplasmic chaperone FimC. Nature Struct. Biol. 5, 885–890 (1998)
73. Kainosho, M., Ono, A. M., Tate, S. & Ono, A. (1997). Nmr spectroscopy of nucleic acids. FASEB J. 11, 1549.


* Pellecchia, M., Güntert, P., Glockshuber, R. & Wüthrich, K. Sequence-specific <sup>1</sup>H, <sup>15</sup>N and <sup>13</sup>C assignments of the periplasmic chaperone FimC from ''Escherichia coli''. [http://dx.doi.org/10.1023/A:1008207111214 J. Biomol. NMR 11, 229–230 (1998)]
74. Kainosho, M. (1997). Isotope labelling of macromolecules for structural determinations. Nat. Struct. Biol. 4, 858-861.


==== 1997 ====


* Billeter, M., Güntert, P., Luginbühl, P., Koradi, R. & Wüthrich, K. Biological macromolecules studied by molecular dynamics simulations. Crosscuts 6, 19–21 (1997)
==== 1996 ====


* Mumenthaler, C., Güntert, P., Braun, W. & Wüthrich, K. Automated combined assignment of NOESY spectra and three-dimensional protein structure determination. [http://dx.doi.org/10.1023/A:1018383106236 J. Biomol. NMR 10, 351–362 (1997)]
75. Ono, A., Makita, T., Tate, S. I., Kawashima, E., Ishido, Y. & Kainosho, M. (1996). C5' methylene proton signal assignment of DNA/RNA oligomers labeled with C5'-monodeuterated nucleosides by H-1-P-31 HSQC spectroscopy. Magn Reson Chem 34, S40-S46.


* Güntert, P., Mumenthaler, C. & Wüthrich, K. Torsion angle dynamics for NMR structure calculation with the new program DYANA. J. Mol. Biol. 273, 283–298 (1997)
76. Miyake, Y., Suzuki, S., Kojima, Y., Kikuchi, K., Kobayashi, K., Nagase, S., Kainosho, M., Achiba, Y., Maniwa, Y. & Fisher, K. (1996). Motion of scandium ions in Sc2C84 observed by Sc-45 solution NMR. Journal of Physical Chemistry 100, 9579-9581.


* Ottiger, M., Zerbe, O., Güntert, P. & Wüthrich, K. The NMR solution conformation of unligated human Cyclophilin A. J. Mol. Biol. 272, 64–81 (1997)
77. Ishii, Y., Terao, T. & Kainosho, M. (1996). Relayed anisotropy correlation NMR: Determination of dihedral angles in solids. Chem Phys Lett 256, 133-140.


* Güntert, P. Calculating protein structures from NMR data. Meth. Mol. Biol. 60, 157–194 (1997)
==== 1995 ====


* Bartels, C., Güntert, P., Billeter, M. & Wüthrich, K. GARANT—A general algorithm for resonance assignment of multidimensional nuclear magnetic resonance spectra. J. Comp. Chem. 18, 139–149 (1997)
78. Tate, S., Ushioda, T., Utsunomiyatate, N., Shibuya, K., Ohyama, Y., Nakano, Y., Kaji, H., Inagaki, F., Samejima, T. & Kainosho, M. (1995). Solution Structure Of A Human Cystatin-A Variant, Cystatin-A(2-98) M65l, By Nmr-Spectroscopy - A Possible Role Of The Interactions Between The N-Termini And C-Termini To Maintain The Inhibitory Active Form Of Cystatin-A. Biochemistry 34, 14637-14648.


==== 1996 ====
79. Tate, S., Ono, A. & Kainosho, M. (1995). Sequential Backbone Assignment In C-13-Labeled Dna By The H-1, C-13, P-31 Triple-Resonance Experiment, Hcp-Cch-Cosy. J Magn Reson Ser B 106, 89-91.


* Wüthrich, K., Billeter, M., Güntert, P., Luginbühl, P., Riek, R. & Wider, G. NMR studies of hydration of biological macromolecules. Faraday Discuss. 103, 245–253 (1996)
80. Tate, S., Kubo, Y., Ono, A. & Kainosho, M. (1995). Stereospecific Measurements Of The Vicinal H-1-P-31 Coupling-Constants For The Diastereotopic C5' Methylene Protons In A Dna Dodecamer With A C-13/H-2 Doubly Labeled Residue - Conformational-Analysis Of The Torsion Angle-Beta. J. Am. Chem. Soc. 117, 7277-7278.


* Arbenz, P., Billeter, M., Güntert, P., Luginbühl, P., Taufer, M. & von Matt, U. Molecular dynamics simulations on Cray clusters using the SCIDDLE-PVM environment. Lecture Notes in Computer Science 1156, 142–149 (1996)
81. Shibuya, K., Kaji, H., Ohyama, Y., Tate, S., Kainosho, M., Inagaki, F. & Samejima, T. (1995). Significance Of The Highly Conserved Gly-4 Residue In Human Cystatin-A. Journal Of Biochemistry 118, 635-642.


* Luginbühl, P., Güntert, P., Billeter, M. & Wüthrich K. The new program OPAL for molecular dynamics simulations and energy refinements of biological macromolecules. [http://dx.doi.org/10.1007/BF00211160 J. Biomol. NMR 8, 136–146 (1996)]
82. Schmidt, J. M., Ernst, R. R., Aimoto, S. & Kainosho, M. (1995). Determination Of Heteronuclear 3-Bond J-Coupling Constants In Peptides By A Simple Heteronuclear Relayed E.Cosy Experiment. J. Biomol. Nmr 6, 95-105.


* Antuch, W., Güntert, P. & Wüthrich, K. Ancestral βγ-crystallin precursor structure in a yeast killer toxin. Nature Struct. Biol. 3, 662–665 (1996)
83. Sakashita, H., Sakuma, T., Akitomo, Y., Ohkubo, T., Kainosho, M., Sekiguchi, M. & Morikawa, K. (1995). Methylation Dependent Functional Switch Mechanism Of The Escherichia-Coli Ada Protein. Proceedings Of The Japan Academy Series B-Physical And Biological Sciences 71, 198-201.


* Billeter, M., Güntert, P., Luginbühl, P. & Wüthrich, K. Hydration and DNA recognition by homeodomains. Cell 85, 1057–1065 (1996)
84. Sakashita, H., Sakuma, T., Akitomo, Y., Ohkubo, T., Kainosho, M., Sekiguchi, M. & Morikawa, K. (1995). Sequence-Specific Dna Recognition Of The Escherichia-Coli Ada Protein Associated With The Methylation-Dependent Functional Switch For Transcriptional Regulation. Journal Of Biochemistry 118, 1184-1191.


* Bartels, C., Billeter, M., Güntert, P. & Wüthrich, K. Automated sequence-specific NMR assignment of homologous proteins using the program GARANT. [http://dx.doi.org/10.1007/BF00202037 J. Biomol. NMR 7, 207–213 (1996)]
85. Oba, M., Ueno, R., Fukuoka, M., Kainosho, M. & Nishiyama, K. (1995). Synthesis Of L-Threo-[1-C-13,2,3-H-2(2)]Amino-Acid And L-Erythro-[1-C-13,2,3-H-2(2)]Amino-Acid - Novel Probes For Conformational-Analysis Of Peptide Side-Chains. Journal Of The Chemical Society-Perkin Transactions 1, 1603-1609.


* Berndt, K. D., Güntert, P. & Wüthrich, K. Conformational sampling by NMR solution structures calculated with the program DIANA evaluated by comparison with long-time molecular dynamics calculations in explicit water. Proteins 24, 304–313 (1996)
86. Lee, W., Revington, M., Farrow, N. A., Nakamura, A., Utsunomiyatate, N., Miyake, Y., Kainosho, M. & Arrowsmith, C. H. (1995). Rapid Corepressor Exchange From The Trp-Repressor/Operator Complex - An Nmr-Study Of [Ul-C-13/N-15]-L-Tryptophan. J. Biomol. Nmr 5, 367-375.


==== 1995 ====
87. Kawashima, E., Toyama, K., Ohshima, K., Kainosho, M., Kyogoku, Y. & Ishido, Y. (1995). Novel Synthesis Of 2'-Deoxy[5'-H-2]Ribonucleoside Derivatives From 5'-O-Ac-2'-Deoxy-5'-Phse-Ribonucleoside Derivatives. Tetrahedron Lett. 36, 6699-6700.


* Bartels, C., Güntert, P. & Wüthrich, K. IFLAT—A new automatic baseline-correction method for multidimensional NMR spectra with strong solvent signals. J. Magn. Reson. A 117, 330–333 (1995)
88. Kawashima, E., Aoyama, Y., Sekine, T., Miyahara, M., Radwan, M. F., Nakamura, E., Kainosho, M., Kyogoku, Y. & Ishido, Y. (1995). Sonochemical And Triethylborane-Induced Tin Deuteride Reduction For The Highly Diastereoselective Synthesis Of (2'r)-2'-Deoxy[2'-H-2]Ribonucleoside Derivatives. J. Org. Chem. 60, 6980-6986.


* Brunne, R. M., Berndt, K. D., Güntert, P., Wüthrich, K. & van Gunsteren, W. F. Structure and internal dynamics of the bovine pancreatic trypsin inhibitor in aqueous solution from long-time molecular dynamics simulations. Proteins 23, 49–62 (1995)
89. Kawashima, E., Aoyama, Y., Radwan, M. F., Miyahara, M., Sekine, T., Kainosho, M., Kyogoku, Y. & Ishido, Y. (1995).


* Bartels, C., Xia, T., Billeter, M., Güntert, P. & Wüthrich, K. The program XEASY for computer-supported NMR spectral analysis of biological macromolecules. [http://dx.doi.org/10.1007/BF00417486 J. Biomol. NMR 6, 1–10 (1995)]
90. Fujiwara, T., Sugase, K., Kainosho, M., Ono, A. & Akutsu, H. (1995). C-13-C-13 And C-13-N-15 Dipolar Correlation Nmr Of Uniformly Labeled Organic-Solids For The Complete Assignment Of Their C-13 And N-15 Signals - An Application To Adenosine. J. Am. Chem. Soc. 117, 11351-11352.


==== 1994 ====
==== 1994 ====


* Güntert, P. Computer–supported protein structure determination by NMR. In Statistical mechanics, protein structure and protein–substrate interactions (Ed. S. Doniach), Plenum Press, New York, pp. 197–207 (1994)
91. Tsuboi, M., Ueda, T., Ushizawa, K., Sasatake, Y., Ono, A., Kainosho, M. & Ishido, Y. (1994). Assignments Of The Deoxyribose Vibrations - Isotopic Thymidine. Bulletin Of The Chemical Society Of Japan 67, 1483-1484.
 
92. Tate, S., Ono, A. & Kainosho, M. (1994). An Alternative Triple-Resonance Method For The Through-Bond Correlation Of Intranucleotide H1' And H8 Nmr Signals Of Purine Nucleotides - Application To A Dna Dodecamer With Fully C-13/N-15-Labeled Deoxyadenosine Residues. J. Am. Chem. Soc. 116, 5977-5978.
 
93. Sakashita, H., Ohkubo, T., Sakuma, T., Kainosho, M., Sekiguchi, M. & Morikawa, K. (1994). Methylation-Dependent Switch Mechanism Of The Escherichia-Coli Ada Protein. Protein Eng 7, 1153-1153.
 
94. Ono, A., Tate, S., Ishido, Y. & Kainosho, M. (1994). Preparation And Heteronuclear 2d Nmr-Spectroscopy Of A Dna Dodecamer Containing A Thymidine Residue With A Uniformly C-13-Labeled Deoxyribose Ring. J. Biomol. Nmr 4, 581-586.
 
95. Ohkubo, T., Sakashita, H., Sakuma, T., Kainosho, M., Sekiguchi, M. & Morikawa, K. (1994). Methylation Dependent Functional Switch Mechanism Newly Found In The Escherichia-Coli Ada Protein. J. Am. Chem. Soc. 116, 6035-6036.
 
96. Nishiyama, K., Oba, M., Ueno, R., Morita, A., Nakamura, Y. & Kainosho, M. (1994). Synthesis Of Phenylalanines Regiospecifically Labeled With Deuterium In The Aromatic Ring. Journal Of Labelled Compounds & Radiopharmaceuticals 34, 831-837.
 
97. Nakagawa, A., Takahashi, S., Uchida, K., Matsuzaki, K., Omura, S., Nakamura, A., Kurihara, N., Nakamatsu, T., Miyake, Y., Take, K. & Kainosho, M. (1994). Biosynthesis Of Lactacystin - Origin Of The Carbons And Stereospecific Nmr Assignment Of The 2 Diastereotopic Methyl-Groups. Tetrahedron Lett. 35, 5009-5012.
 
98. Nakagawa, A., Kainosho, M. & Omura, S. (1994).


* Antuch, W., Güntert, P., Billeter, M., Hawthorne, T., Grossenbacher, H. & Wüthrich, K. NMR solution structure of the recombinant tick anticoagulant protein (rTAP), a factor Xa inhibitor from the tick ''Ornithodoros moubata''. FEBS Lett. 352, 251–257 (1994)
99. Kijima, M., Yamashita, H., Kainosho, M. & Sato, T. (1994). A Novel Oxygenative Carbon-Carbon Bond-Cleavage Reaction By Irradiation Of Alkylcobaloximes Having A Phenyl Group At The Beta-Position. J. Org. Chem. 59, 6748-6752.


==== 1993 ====
==== 1993 ====


* Wüthrich, K., Güntert, P. & Berndt, K. D. Computer–supported NMR structure determination of proteins in solution illustrated with studies of protein proteinase inhibitors. In Proceedings of the workshop on innovations on proteases and their inhibitors: fundamental and applied aspects (Ed. F. X. Avilés), de Gruyter, Berlin (1993)
100. Wang, J. F., Hinck, A. P., Kainosho, M. & Markley, J. L. (1993). Determination Of The Solution Structure Of Staphylococcal Nuclease-H124l. J. Cell. Biochem., 303-303.
 
* Berndt, K. D., Güntert, P. & Wüthrich, K. The NMR solution structure of dendrotoxin K from the venom of ''Dendroaspis polylepis polylepis''. J. Mol. Biol. 234, 735–750 (1993)
101. Seigneuret, M. & Kainosho, M. (1993). Localization Of Methionine Residues In Bacteriorhodopsin By Carbonyl C-13-Nmr With Sequence-Specific Assignments. Febs Lett. 327, 7-12.
 
102. Sakashita, H., Sakuma, T., Ohkubo, T., Kainosho, M., Sakumi, K., Sekiguchi, M. & Morikawa, K. (1993). Folding Topology And Dna-Binding Of The N-Terminal Fragment Of Ada Protein. Febs Lett. 323, 252-256.
 
103. Kawashima, E., Aoyama, Y., Sekine, T., Nakamura, E., Kainosho, M., Kyogoku, Y. & Ishido, Y. (1993). Sonochemical And Triethylborane-Induced Tin Deuteride Reduction For The Highly Stereoselective Synthesis Of (2'r)-[2'-H-2]-2'-Deoxyribonucleosides From 2'-Functionalized Ribonucleosides. Tetrahedron Lett. 34, 1317-1320.
 
==== 1992 ====
 
104. Kikuchi, K., Nakahara, N., Wakabayashi, T., Suzuki, S., Shiromaru, H., Miyake, Y., Saito, K., Ikemoto, I., Kainosho, M. & Achiba, Y. (1992). Nmr Characterization Of Isomers Of C-78, C-82 And C-84 Fullerenes. Nature 357, 142-145.
 
==== 1991 ====
 
105. Uchida, K. & Kainosho, M. (1991). Synthesis Of [1,1'-C-13(2)]-L-Cystine. Journal Of Labelled Compounds & Radiopharmaceuticals 29, 867-874.
 
106. Higashijima, T., Graziano, M. P., Suga, H., Kainosho, M. & Gilman, A. G. (1991). F-19 And P-31 Nmr-Spectroscopy Of G-Protein Alpha-Subunits - Mechanism Of Activation By Al3+ And F. J. Biol. Chem. 266, 3396-3401.
 
107. Achiba, Y., Nakagawa, T., Matsui, Y., Suzuki, S., Shiromaru, H., Yamauchi, K., Nishiyama, K., Kainosho, M., Hoshi, H., Maruyama, Y. & Mitani, T. (1991). Visible, Uv, And Vuv Absorption-Spectra Of C-60 Thin-Films Grown By The Molecular-Beam Epitaxy (Mbe) Technique. Chemistry Letters, 1233-1236.
 
==== 1989 ====
 
108. Oda, K., Fukuda, Y., Murao, S., Uchida, K. & Kainosho, M. (1989). A Novel Proteinase-Inhibitor, Tyrostatin, Inhibiting Some Pepstatin-Insensitive Carboxyl Proteinases. Agric. Biol. Chem. 53, 405-415.
 
109. Kato, K., Matsunaga, C., Nishimura, Y., Waelchli, M., Kainosho, M. & Arata, Y. (1989). Application Of C-13 Nuclear Magnetic-Resonance Spectroscopy To Molecular Structural-Analyses Of Antibody Molecules. Journal Of Biochemistry 105, 867-869.
 
==== 1988 ====
 
110. Westler, W. M., Kainosho, M., Nagao, H., Tomonaga, N. & Markley, J. L. (1988). Two-Dimensional Nmr Strategies For Carbon Carbon Correlations And Sequence-Specific Assignments In C-13 Labeled Proteins. J. Am. Chem. Soc. 110, 4093-4095.
 
111. Kainosho, M. & Miyake, Y. (1988). Structural Study Of Ssi-Subtilisin Complexes By Means Of Stable Isotope Aided Nmr-Spectroscopy. Nippon Nogeikagaku Kaishi-Journal Of The Japan Society For Bioscience Biotechnology And Agrochemistry 62, 1822-1827.
 
112. Akasaka, K., Inoue, T., Tamura, A., Watari, H., Abe, K. & Kainosho, M. (1988). Internal Motion Of A Tryptophan Residue In Streptomyces Subtilisin Inhibitor - Deuterium Nuclear Magnetic-Resonance In Solution. Proteins-Structure Function And Genetics 4, 131-136.
 
==== 1987 ====
 
113. Kainosho, M., Nagao, H. & Tsuji, T. (1987). Local Structural Features Around The C-Terminal Segment Of Streptomyces Subtilisin Inhibitor Studied By Carbonyl Carbon Nuclear Magnetic Resonances Of 3 Phenylalanyl Residues. Biochemistry 26, 1068-1075.
 
==== 1986 ====
 
114. Arai, M., Sumida, M., Fukuhara, K., Kainosho, M. & Murao, S. (1986). Isolation And Characterization Of Amylase Inhibitors, (Glucose)N.Deoxynojirimycin. Agric. Biol. Chem. 50, 639-644.
 
==== 1985 ====
 
115. Sato, T., Wada, T., Komeichi, Y. & Kainosho, M. (1985). Electron-Organic Chemistry .9. Stereochemical Control In Electron-Transfer Induced Reactions - Cyclic Voltammetry And Cathodic Reduction Of Epimeric 3-Halogeno-6-Nitro-5-Cholestenes. Bulletin Of The Chemical Society Of Japan 58, 1452-1457.
 
116. Kainosho, M., Nagao, H., Imamura, Y., Uchida, K., Tomonaga, N., Nakamura, Y. & Tsuji, T. (1985). Structural Studies Of A Protein Using The Assigned Back-Bone Carbonyl C-13 Nmr Resonances. J. Mol. Struct. 126, 549-562.
 
==== 1982 ====


* Güntert, P., Berndt, K. D. & Wüthrich, K. The program ASNO for computer-supported collection of NOE upper distance constraints as input for protein structure determination. [http://dx.doi.org/10.1007/BF00174613 J. Biomol. NMR 3, 601–606 (1993)]
117. Uesugi, S., Nakagawa, E., Ohtsuka, E., Ikehara, M., Watanabe, M., Kobayashi, Y., Kyogoku, Y. & Kainosho, M. (1982). Unambiguous Assignments Of The Imino Proton Resonances Of A G-U Wobble Base Pair. J. Am. Chem. Soc. 104, 7340-7341.


* Güntert, P., Schaefer, N., Otting, G. & Wüthrich K. POMA, a complete Mathematica implementation of the NMR product operator formalism. J. Magn. Reson. A 101, 103–105 (1993)
118. Kyogoku, Y., Watanabe, M., Kainosho, M. & Oshima, T. (1982). A N-15-Nmr Study On Ribonuclease T1-Guanylic Acid Complex. Journal Of Biochemistry 91, 675-679.


* Szyperski, T., Luginbühl, P., Otting, G., Güntert, P. & Wüthrich, K. Protein dynamics studied by rotating frame 15N spin relaxation times. [http://dx.doi.org/10.1007/BF00178259 J. Biomol. NMR 3, 151–164 (1993)]
119. Kainosho, M. & Tsuji, T. (1982). Assignment Of The 3 Methionyl Carbonyl Carbon Resonances In Streptomyces Subtilisin Inhibitor By A C-13 And N-15 Double-Labeling Technique - A New Strategy For Structural Studies Of Proteins In Solution. Biochemistry 21, 6273-6279.


* Güntert, P. Neue Rechenverfahren für die Proteinstrukturbestimmung mit Hilfe der magnetischen Kernspinresonanz. [http://e-collection.ethbib.ethz.ch/show?type=diss&nr=10135 Ph.D. Thesis ETH 10135 (1993)]
120. Harada, I., Takeuchi, H., Tasumi, M., Tsuji, T. & Kainosho, M. (1982). Raman-Spectroscopic Study Of Streptomyces Subtilisin Inhibitor. Journal Of Raman Spectroscopy 13, 276-279.


==== 1992 ====
121. Akasaka, K., Hatano, H., Tsuji, T. & Kainosho, M. (1982). Proton Magnetic-Resonance Study Of The Tryptophan Residue Of Streptomyces Subtilisin Inhibitor. Biochimica Et Biophysica Acta 704, 503-508.
 
==== 1981 ====
 
122. Watanabe, M., Sugeta, H., Iwahashi, H., Kyogoku, Y. & Kainosho, M. (1981). Detection Of Proton-Acceptor Sites Of Hydrogen-Bonding In Adenine . Uracil Base-Pairs By The Use Of N-15 Magnetic-Resonance. Eur. J. Biochem. 117, 553-558.
 
123. Nakazawa, H., Ajisaka, K., Kainosho, M., Sawada, S. & Yamada, H. (1981). Stereochemistry Of Decarboxylation Reactions Catalyzed By A Constitutive Aromatic L-Amino-Acid Decarboxylase. Agric. Biol. Chem. 45, 2553-2557.
 
124. Kainosho, M. & Tsuji, T. (1981). Dihedral-Angle Dependence Of The Vicinal N-15,C-13 Spin-Coupling Constants - A New Nmr Parameter For The Conformational-Analysis Of Amino-Acids And Peptides. Organic Magnetic Resonance 17, 46-49.
 
==== 1980 ====
 
125. Kyogoku, Y., Watanabe, M., Kainosho, M. & Oshima, T. (1980). N-15-Nmr Study On Ribonuclease T1-Guanylic Acid Complex. Studia Biophysica 81, 123-124.
 
==== 1979 ====
 
126. Takeuchi, Y., Murai, A., Takahara, Y. & Kainosho, M. (1979). Structure Of Permetin-A, A New Polypeptin Type Antibiotic Produced By Bacillus-Circulans. J. Antibiot. 32, 121-129.
 
127. Murai, A., Kainosho, M., Takeuchi, Y., Kato, T. & Kimizuka, A. (1979). New Strategy In Food Analysis Using Liquid-Chromatography And C-13 Nmr-Spectroscopy. Abstracts Of Papers Of The American Chemical Society, 14-14.
 
128. Kainosho, M., Ajisaka, K., Sawada, S., Tanokura, M. & Miyazawa, T. (1979). Assignment Of Beta-Proton Resonances Of L-Histidine By Stereoselective Deuterium Substitution. Chemistry Letters, 395-396.
 
129. Kainosho, M. (1979). Caution In Using N-15-C-13 Spin-Spin Coupling For Determining (Bio)Synthetic Pathways. J. Am. Chem. Soc. 101, 1031-1032.
 
130. Kainosho, M. (1979). Assignments Of C-13 Nmr-Spectra Of Cyclic-Nucleotides. Organic Magnetic Resonance 12, 548-550.
 
==== 1978 ====
 
131. Kainosho, M., Kroon, P. A., Lawaczeck, R., Petersen, N. O. & Chan, S. I. (1978). Chainlength Dependence Of H-1 Nmr Relaxation Rates In Bilayer Vesicles. Chemistry And Physics Of Lipids 21, 59-68.
 
132. Kainosho, M. & Ajisaka, K. (1978). C-13 Nuclear Magnetic-Resonance Spectra Of Gross Plant-Tissues Containing Starch. Tetrahedron Lett., 1563-1566.
 
==== 1977 ====
 
133. Lawaczeck, R., Blackman, R. & Kainosho, M. (1977). Ion Permeation Across Bilayer Of Annealed Phosphatidylcholine Vesicles At Elevated-Temperatures - Concentration-Dependence And Micelle-Bilayer Dynamic Equilibrium. Biochimica Et Biophysica Acta 468, 411-422.
 
134. Kung, W. J., Marsh, R. E. & Kainosho, M. (1977). Crystal And Solution Structure Of 2',5'-Arabinosylcytidine Monophosphate - Influence Of Poc Bond Angles On Proton-Phosphorus Vicinal Coupling-Constants In P-O-C-H Fragments. J. Am. Chem. Soc. 99, 5471-5477.
 
135. Kainosho, M., Ajisaka, K. & Nakazawa, H. (1977). Insitu Analysis Of Microbial Fermentation Process By Natural Abundance C-13 And P-31 Nmr-Spectroscopy Production Of Adenosine-5'-Triphosphate From Adenosine. Febs Lett. 80, 385-389.
 
==== 1976 ====
 
136. Murai, A. & Kainosho, M. (1976). Hydrogen Rearrangements In Cyclic Phosphates During Electron Impact-Induced Fragmentation. Organic Mass Spectrometry 11, 175-182.
 
137. Lawaczeck, R., Kainosho, M. & Chan, S. I. (1976). Formation And Annealing Of Structural Defects In Lipid Bilayer Vesicles. Biochimica Et Biophysica Acta 443, 313-330.
 
138. Kroon, P. A., Kainosho, M. & Chan, S. I. (1976). Proton Magnetic-Resonance Studies Of Lipid Bilayer Membranes - Experimental-Determination Of Intermolecular And Intramolecular Nuclear-Relaxation Rates In Sonicated Phosphatidylcholine Bilayer Vesicles. Biochimica Et Biophysica Acta 433, 282-293.
 
139. Kainosho, M. & Konishi, H. (1976). C-13 Nuclear Magnetic-Resonance Spectrum Of Dried Star Anise Fruits And Its Histological Implications. Tetrahedron Lett., 4757-4760.
 
140. Kainosho, M. (1976). C-13 Nmr-Studies Of Intact Plant-Tissues - Cytoplasmic Aucubin And Sucrose In A Single Seed Of Aucuba-Japonica. Tetrahedron Lett., 4279-4282.
 
==== 1975 ====
 
141. Petersen, N. O., Kroon, P. A., Kainosho, M. & Chan, S. I. (1975). Thermal Phase-Transitions In Deuterated Lecithin Bilayers. Chemistry And Physics Of Lipids 14, 343-349.
 
142. Lichtenberg, D., Petersen, N. O., Girardet, J. L., Kainosho, M., Kroon, P. A., Seiter, C. H. A., Feigenson, G. W. & Chan, S. I. (1975). Interpretation Of Proton Magnetic-Resonance Linewidths For Lecithin Dispersions - Effect Of Particle-Size And Chain Packing. Biochimica Et Biophysica Acta 382, 10-21.
 
143. Lawaczeck, R., Kainosho, M., Girardet, J. L. & Chan, S. I. (1975). Effects Of Structural Defects In Sonicated Phospholipid Vesicles On Fusion And Ion Permeability. Nature 256, 584-586.
 
144. Kroon, P. A., Kainosho, M. & Chan, S. I. (1975). State Of Molecular-Motion Of Cholesterol In Lecithin Bilayers. Nature 256, 582-584.
 
145. Kainosho, M., Ajisaka, K., Kamisaku, M., Murai, A. & Kyogoku, Y. (1975). Conformational-Analysis Of Amino-Acids And Peptides Using Specific Isotope Substitution .1. Conformation Of L-Phenylalanylglycine. Biochem. Biophys. Res. Commun. 64, 425-432.
 
146. Kainosho, M. & Ajisaka, K. (1975). Conformational-Analysis Of Amino-Acids And Peptides Using Specific Isotope Substitution .2. Conformation Of Serine, Tyrosine, Phenylalanine, Aspartic-Acid, Asparagine, And Aspartic-Acid Beta-Methyl Ester In Various Ionization States. J. Am. Chem. Soc. 97, 5630-5631.
 
147. Kainosho, M. & Ajisaka, K. (1975). Conformational Study Of Cyclic Nucleotides - Lanthanide Ion Assisted Analysis Of Hydrogen-1 Nuclear Magnetic-Resonance Spectra. J. Am. Chem. Soc. 97, 6839-6843.
 
148. Ajisaka, K. & Kainosho, M. (1975). Gd(Fod)3-Induced Contact Shifts - Versatile New Method To Estimate Contact And Pseudocontact Shift Contributions To Observed Lanthanide-Induced Shifts. J. Am. Chem. Soc. 97, 330-334.
 
149. Ajisaka, K. & Kainosho, M. (1975). Diastereomeric Interaction Of Partially Resolved Amines Facilitated By Lanthanide Chelates - Evidence For Dynamic Equilibrium Between 7-Coordinate And 8-Coordinate Alkylamine-Lanthanide Chelate Adducts. J. Am. Chem. Soc. 97, 1761-1765.
 
==== 1974 ====
 
150. Sato, T., Takemura, T. & Kainosho, M. (1974). C-13 Nuclear Magnetic-Resonance Spectra Of Strained Molecules - Diamagnetic And Paramagnetic Shifts Of Sterically Compressed Carbon Resonances In [2,2]Metacyclophanes. Journal Of The Chemical Society-Chemical Communications, 97-98.
 
==== 1973 ====
 
151. Tori, K., Yoshimur.Y, Kainosho, M. & Ajisaka, K. (1973). Evidence For Presence Of Contact Term Contribution To Lanthanide Induced Shifts In H-1 And C-13 Nmr-Spectra Of Pyridine N-Oxides. Tetrahedron Lett., 1573-1576.
 
152. Tori, K., Yoshimur.Y, Kainosho, M. & Ajisaka, K. (1973). Importance Of Complex-Formation And Contact Shifts In Application Of Lanthanide Shift Reagents To H-1 And C-13nmr Spectra Of Aromatic-Compounds. Tetrahedron Lett., 3127-3130.
 
153. Kainosho, M. & Ajisaka, K. (1973). Recent Progress Of Application Of Lanthanide Shift Reagents In Organic-Chemistry. Journal Of Synthetic Organic Chemistry Japan 31, 126-148.
 
154. Ajisaka, K., Kainosho, M., Shigemot.H, Tori, K., Wolkowsk.Zw & Yoshimur.Y. (1973). Conspicuous Effects Due To Complex-Formation And Contact Term Upon Lanthanide-Induced Shifts In 19-F Nmr Of Some Fluoroaromatic Compounds. Chemistry Letters, 1205-1208.
 
==== 1972 ====
 
155. Sato, T., Uno, K. & Kainosho, M. (1972). New Synthesis Of Bridged Aromatics - 10,15-Dihydro-5h-Tribenzo[A,D,G]Cyclononene And Its Analogs. Journal Of The Chemical Society-Chemical Communications, 579-&.
 
156. Matsuura, K., Ishido, Y., Kainosho, M. & Araki, Y. (1972). Synthetic Studies Of Carbohydrate Derivatives With Photochemical Reaction .5. Photochemical Reaction Of D-Glucal And 2-Hydroxy-D-Glucal Acetates With Lactonitrile. Chemistry Letters, 853-&.
157. Kainosho, M. & Kyogoku, Y. (1972). High-Resolution Proton And Phosphorus Nuclear Magnetic-Resonance Spectra Of Flavin-Adenine Dinucleotide And Its Conformation In Aqueous-Solution. Biochemistry 11, 741-&.
 
158. Kainosho, M., Beare, S. D., Ajisaka, K. & Pirkle, W. H. (1972). Use Of Chiral Solvents Or Lanthanide Shift Reagents To Distinguish Meso From D Or L Diastereomers. J. Am. Chem. Soc. 94, 5924-&.
 
159. Kainosho, M., Ajisaka, K. & Tori, K. (1972). Evidence For Presence Of Contact Term Contribution To Lanthanide-Induced Isotropic Shifts In C-13 And F-19 Nmr-Spectra Of Aliphatic-Compounds - Caution For Applications Of Lanthanide Shift Reagents. Chemistry Letters, 1061-1064.
 
160. Ajisaka, K., Kainosho, M. & Kamisaku, M. (1972). Enantiomeric Shift Difference Induced By Lanthanide Shift Reagent - Its Correlation With Absolute Configuration Of Alpha-Amino Acids. Chemistry Letters, 857-&.
 
==== 1971 ====
 
161. Sato, T., Wakabaya.M, Hata, K. & Kainosho, M. (1971). Medium-Sized Cyclophanes .12. Syntheses, Variable Temperature Pmr Spectra, And Conformational Aspects Of [M.N]Metacyclophane Sulfur Analogs - Effect Of Ring Size And Substitution On Conformation And Conformational Changes. Tetrahedron 27, 2737-&.
 
162. Iwashita, Y., Ishikawa, A. & Kainosho, M. (1971). Spectroscopic Study On Bond Hybridization Of Co-Ordinated Acetylenes. Spectrochimica Acta Part A-Molecular Spectroscopy A 27, 271-&.
 
163. Haga, K., Kainosho, M. & Yoshikaw.M. (1971). Studies Of Phosphorylation .5. Synthesis Of Inosine-5'-Thiophosphates. Bulletin Of The Chemical Society Of Japan 44, 460-&.
 
164. Akimoto, T., Tsuboi, M., Kainosho, M., Tamura, F., Nakamura, A., Muraishi, S. & Kajiura, T. (1971). Conformation Of Alpha-Aminobutyric Acid In Aqueous Solution. Bulletin Of The Chemical Society Of Japan 44, 2577-&.
 
==== 1970 ====
 
165. Kainosho, M. (1970). Phosphorus-Proton Spin-Spin Coupling Constants In Acyclic Phosphates. Journal Of Physical Chemistry 74, 2853-&.
 
==== 1969 ====


* Szyperski, T., Güntert, P., Stone, S. R. & Wüthrich, K. NMR solution structure of hirudin(1–51) and comparison with corresponding three-dimensional structures determined using the complete 65-residue hirudin polypeptide chain. J. Mol. Biol. 228, 1193–1205 (1992)
166. Tsuboi, M., Takahash.S, Kyogoku, Y., Hayatsu, H., Ukita, T. & Kainosho, M. (1969). Phosphorus-Proton Spin-Spin Coupling And Conformation Of A Dinucleoside Phosphate. Science 166, 1504-&.


* Szyperski, T., Güntert, P., Stone, S. R., Tulinsky, A., Bode, W., Huber, R. & Wüthrich, K. Impact of protein-protein contacts on the conformation of thrombin-bound hirudin studied by comparison with the NMR solution structure of hirudin(1–51). J. Mol. Biol. 228, 1206–1211 (1992)
167. Murayama, W. & Kainosho, M. (1969). Crystal Structure Of 5,5-Dimethyl-2-Oxo-2-Hydroxy-1,3,2-Dioxaphosphorinane Monohydrate. Bulletin Of The Chemical Society Of Japan 42, 1819-&.


* Güntert, P., Dötsch, V., Wider, G. & Wüthrich K. Processing of multi-dimensional NMR data with the new software PROSA. [http://dx.doi.org/10.1007/BF02192850 J. Biomol. NMR 2, 619–629 (1992)]
168. Kainosho, M. & Shimozaw.T. (1969). Dipole Moment And Conformation Of 2,2-Disubstituted-1,3,2-Dioxaphosphorinanes. Tetrahedron Lett., 865-&.


* Berndt, K. D., Güntert, P., Orbons, L. P. M. & Wüthrich, K. Determination of a high-quality NMR solution structure of the bovine pancreatic trypsin inhibitor (BPTI) and comparison with three crystal structures. J. Mol. Biol. 227, 757–775 (1992)
169. Kainosho, M., Nakamura, A. & Tsuboi, M. (1969). Phosphorus-Proton Spin-Spin Coupling In P-O-C-H Group . A Comparison Of Cyclic And Acyclic Systems. Bulletin Of The Chemical Society Of Japan 42, 1713-&.


* Szyperski, T., Güntert, P., Otting, G. & Wüthrich, K. Determination of scalar coupling constants by inverse Fourier transformation of in-phase multiplets. J. Magn. Reson. 99, 552– 560 (1992)
170. Kainosho, M. & Nakamura, A. (1969). Nuclear Magnetic Resonance Spectrum Of 2,7,8,-Trioxa-1-Phosphabicyclo [3.2.1] Octane - A Further Observation Of Through-Space Long-Range Coupling Constant. Tetrahedron 25, 4071-&.


* Güntert, P. & Wüthrich, K. FLATT—A new procedure for high-quality baseline correction of two- and higher-dimensional NMR spectra. J. Magn. Reson. 96, 403–407 (1992)
171. Kainosho, M., Morofush.T & Nakamura, A. (1969). Conformational Dependence Of P=O Stretching Vibration Frequency In 6-Membered Cyclic Phosphates. Bulletin Of The Chemical Society Of Japan 42, 845-&.


==== 1991 ====
172. Kainosho, M. (1969). Removal Of Spin-Spin Coupling By Addition Of Paramagnetic Metal Complexes. Journal Of Physical Chemistry 73, 3516-&.


* Mertz, J. E., Güntert, P., Wüthrich, K. & Braun, W. Complete relaxation matrix refinement of NMR structures of proteins using analytically calculated dihedral angle derivatives of NOE intensities. [http://dx.doi.org/10.1007/BF01875519 J. Biomol. NMR 1, 257–269 (1991)]
==== 1968 ====


* Eccles, C., Güntert, P., Billeter, M. & Wüthrich, K. Efficient analysis of protein 2D NMR spectra using the software package EASY. [http://dx.doi.org/10.1007/BF01877224 J. Biomol. NMR 1, 111–130 (1991)]
173. Sato, T., Wakabaya.M, Kainosho, M. & Hata, K. (1968). Conformational Changes In Sulfur Analogs Of 11- And 12-Membered Metacyclophanes. Tetrahedron Lett., 4185-&.


* Güntert, P. & Wüthrich, K. Improved efficiency of protein structure calculations from NMR data using the program DIANA with redundant dihedral angle constraints. [http://dx.doi.org/10.1007/BF02192866 J. Biomol. NMR 1, 447–456 (1991)]
174. Sato, T., Akabori, S., Kainosho, M. & Hata, K. (1968). Medium-Sized Cyclophanes .6. High-Temperature Nmr Spectra Of [2.2]Metacyclophane And Optical Resolution Of 4,14-Disubstituted Derivatives. Bulletin Of The Chemical Society Of Japan 41, 218-&.


* Güntert, P., Braun, W. & Wüthrich, K. Efficient computation of three-dimensional protein structures in solution from nuclear magnetic resonance data using the program DIANA and the supporting programs CALIBA, HABAS and GLOMSA. J. Mol. Biol. 217, 517–530 (1991)
==== 1967 ====


* Güntert, P., Qian, Y. Q., Otting, G., Müller, M., Gehring, W. J. & Wüthrich K. Structure determination of the Antp(C39S) homeodomain from nuclear magnetic resonance data in solution using a novel strategy for the structure calculation with the programs DIANA, CALIBA, HABAS and GLOMSA. J. Mol. Biol. 217, 531–540 (1991)
* Sato, T., Saito, Y., Kainosho, M. & Hata, K. (1967). A new Synthesis of dialkoxymethane. Magnetic nonequivalence of methylene protons in certain dialkoxymethane. Bulletin of the Chemical Society of Japan 40, 391-&.


==== 1989 ====
==== 1966 ====


* Güntert, P., Braun, W., Billeter, M. & Wüthrich, K. Automated stereospecific <sup>1</sup>H NMR assignments and their impact on the precision of protein structure determinations in solution. J. Amer. Chem. Soc. 111, 3997–4004 (1989)
* Sato, T., Akabori, S., Kainosho, M. & Hata, K. (1966). Medium-Sized Cyclophanes .2. Stereoselective synthesis and optical resolution of 4 14-dimethyl(2.2)Mmtacyclophane. Bulletin of the Chemical Society of Japan 39, 856-&.

Latest revision as of 12:00, 17 December 2008

Selected publications

  • Kainosho, M., Torizawa, T., Iwashita, Y., Terauchi, T., Ono, A. M. & Güntert, P. Optimal isotope labeling for NMR protein structure determinations. Nature 440, 52–57 (2006)


All publications

2008 2007 2006 2005 2004 2003 2002 2001 2000 1999 1998 1997 1996 1995 1994 1993 1992 1991

1989 1988 1987 1986 1985 1982 1981 1980 1979 1978 1977 1976 1975 1974 1973 1972 1971 1970 1969 1968 1967 1966


2008

  • Terauchi, T., Kobayashi, K., Okuma, K., Oba, M., Nishiyama, K. & Kainosho, M. Stereoselective synthesis of triply isotope-labeled Ser, Cys, and Ala: Amino acids for stereoarray isotope labeling technology. Org. Lett. 10, 2785-2787 (2008)
  • Takeda, M., Sugimori, N., Torizawa, T., Terauchi, T., Ono, A. M., Yagi, H., Yamaguchi, Y., Kato, K., Ikeya, T., Güntert, P., Aceti, D. J., Markley, J. L. & Kainosho, M. Structure of the putative 32 kDa myrosinase binding protein from Arabidopsis (At3g16450.1) as determined by the SAIL-NMR method. FEBS J. 275, 5873–5884 (2008)
  • Yoshida, H., Furuya, N., Lin, Y. J., Güntert, P., Komano, T. & Kainosho, M. Structural basis of the role of the NikA ribbon-helix-helix domain in initiating bacterial conjugation. J. Mol. Biol. 384, 690–701 (2008)
  • Takeda, M., Chang, C. K., Ikeya, T., Güntert, P., Chang, Y. H., Hsu, Y. L., Huang, T. H. & Kainosho, M. Solution structure of the C-terminal dimerization domain of SARS coronavirus nucleocapsid protein determined by the SAIL-NMR method. J. Mol. Biol. 380, 608–622 (2008)

2007

  • Ikeya, T., Güntert, P. & Kainosho, M. NMRによる蛋白質構造決定の自動化. In 計算シミュレーションと分析データ解析, Maruzen, Tokyo, pp. 148–166 (2007) (in Japanese)

2006

  • Kainosho, M. & Güntert, P. 高分子量タンパク質のNMR構造決定-より速く、より正確に: タンパク質NMRの常識を覆す革新技術SAIL法. Stereo-array isotope labeling for faster and more accurate NMR structure determinations of high molecular weight proteins. Biotechnology J. (Tokyo) 6, 467–470 (2006) (in Japanese)
  • Sasaki, T., Takahashi, S., Uchida, K., Funayama, S., Kainosho, M. & Nakagawa, A. Biosynthesis of quinolactacin A, a TNF production inhibitor. J. Antibiot. 59, 418-427 (2006).
  • Kainosho, M., Torizawa, T., Iwashita, Y., Terauchi, T., Ono, A. M. & Güntert, P. Optimal isotope labeling for NMR protein structure determinations. Nature 440, 52–57 (2006)

2005

  • Uchida, K., Markley, J. L. & Kainosho, M. (2005). Carbon-13 NMR method for the detection of correlated hydrogen exchange at adjacent backbone peptide amides and its application to hydrogen exchange in five antiparallel beta strands within the hydrophobic core of Streptomyces subtilisin inhibitor (SSI). Biochemistry 44, 11811-11820.
  • Torizawa, T., Ono, A. M., Terauchi, T. & Kainosho, M. (2005). NMR assignment methods for the aromatic ring resonances of phenylalanine and tyrosine residues in proteins. J. Am. Chem. Soc. 127, 12620-12626.
  • Chi, S. W., Lee, S. H., Kim, D. H., Ahn, M. J., Kim, J. S., Woo, J. Y., Torizawa, T., Kainosho, M. & Han, K. H. Structural details on mdm2-p53 interaction. J. Biol. Chem. 280, 38795-38802 (2005).

2004

  • Torizawa, T., Shimizu, M., Taoka, M., Miyano, H. & Kainosho, M. Efficient production of isotopically labeled proteins by cell-free synthesis: A practical protocol. J. Biomol. NMR 30, 311-325 (2004)
  • Sugimori, N., Torizawa, T., Aceti, D. J., Thao, S., Markley, J. L. & Kainosho, M. Letter to the Editor: 1H, 13C and 15N backbone assignment of a 32 kDa hypothetical protein from Arabidopsis thaliana, At3g16450.1. J. Biomol. NMR 30, 357-358 (2004)
  • Ohki, S., Eto, M., Takada, R., Shimizu, M., Brautigan, D. L. & Kainosho, M. Phosphorylation-induced conformational change responsible for the function of a myosin phosphatase inhibitor, CPI-17. Sci. Technol. Adv. Mater. 5, 383-386 (2004)

2003

  • Tashiro, M., Okubo, S., Shimotakahara, S., Hatanaka, H., Yasuda, H., Kainosho, M., Yokoyama, S. & Shindo, H. NMR structure of ubiquitin-like domain in PARKIN: Gene product of familial Parkinson's disease. J. Biomol. NMR 25, 153-156 (2003)
  • Ohki, S. Y., Eto, M., Shimizu, M., Takada, R., Brautigan, D. L. & Kainosho, M. Distinctive solution conformation of phosphatase inhibitor CPI-17 substituted with aspartate at the phosphorylation-site threohine residue. J. Mol. Biol. 326, 1539-1547 (2003)
  • Boisbouvier, J., Wu, Z. R., Ono, A., Kainosho, M. & Bax, A. Rotational diffusion tensor of nucleic acids from C-13 NMR relaxation. J. Biomol. NMR 27, 133-142 (2003)

2002

  • Torizawa, T., Terauchi, T. & Kainosho, M. Recent developments in NMR methods for structural biology. Seikagaku 74, 1279-1284 (2002)
  • Tanaka, Y., Kojima, C., Morita, E. H., Kasai, Y., Yamasaki, K., Ono, A., Kainosho, M. & Taira, K. Identification of the metal ion binding site on an RNA motif from hammerhead ribozymes using N-15 NMR spectroscopy. J. Am. Chem. Soc. 124, 4595-4601 (2002)
  • Nomura, K. & Kainosho, M. Graphical analysis of the relative orientation of molecular alignment tensors for a protein dissolved in two different anisotropic media. J. Magn. Reson. 154, 146-153 (2002)
  • Abu-Abed, M., Mal, T. K., Kainosho, M., MacLennan, D. H. & Ikura, M. Characterization of the ATP-binding domain of the sarco(endo)plasmic reticulum Ca2+-ATPase: Probing nucleotide binding by multidimensional NMR. Biochemistry 41, 1156-1164 (2002)

2001

  • Wu, Z. R., Ono, A., Kainosho, M. & Bax, A. H center dot center dot center dot N hydrogen bond lengths in double stranded DNA from internucleotide dipolar couplings. J. Biomol. NMR 19, 361-365 (2001)
  • Riek, R., Pervushin, K., Fernandez, C., Kainosho, M. & Wuthrich, K. [13C,13C]- and [13C,1H]-TROSY in a triple resonance experiment for ribose-base and intrabase correlations in nucleic acids. J. Am. Chem. Soc. 123, 658-664 (2001)
  • Ohki, S. Y., Eto, M., Kariya, E., Hayano, T., Hayashi, Y., Yazawa, M., Brautigan, D. & Kainosho, M. Solution NMR structure of the myosin phosphatase inhibitor protein CPI-17 shows phosphorylation-induced conformational changes responsible for activation. J. Mol. Biol. 314, 839-849 (2001)
  • Ohki, S., Kariya, E., Hiraga, K., Wakamiya, A., Isobe, T., Oda, K. & Kainosho, M. (2001). NMR structure of Streptomyces killer toxin-like protein, SKLP: Further evidence for the wide distribution of single-domain beta gamma-crystallin superfamily proteins. J. Mol. Biol. 305, 109-120 (2001)
  • Oba, M., Kobayashi, M., Oikawa, F., Nishiyama, K. & Kainosho, M. (2001). Synthesis of C-13/D doubly labeled L-leucines: Probes for conformational analysis of the leucine side-chain. J. Org. Chem. 66, 5919-5922 (2001)
  • Kurokawa, H., Osawa, M., Kurihara, H., Katayama, N., Tokumitsu, H., Swindells, M. B., Kainosho, M. & Ikura, M. (2001). Target-induced conformational adaptation of calmodulin revealed by the crystal structure of a complex with nematode Ca2+/calmodulin-dependent kinase kinase peptide. J. Mol. Biol. 312, 59-68 (2001)
  • Kojima, C., Ulyanov, N. B., Kainosho, M. & James, T. L. Slow motion in the CAA center dot TTG sequence of a DNA decamer duplex studied by NMR. Biochemistry 40, 7239-7246 (2001)
  • Kojima, C., Ono, A. M., Ono, A. & Kainosho, M. (2001). Solid-phase synthesis of selectively labeled DNA: Applications for multidimensional nuclear magnetic resonance spectroscopy. In Nuclear Magnetic Resonance of Biologica Macromolecules, Pt A, Vol. 338, pp. 261-283.
  • Kojima, C., Kawashima, E., Sekine, T., Ishido, Y., Ono, A., Kainosho, M. & Kyogoku, Y. Sugar conformation of a stereospecific 2 '-R or 2 '-S deuterium-labeled DNA decamer studied with proton-proton J coupling constants. J. Biomol. NMR 19, 19-31 (2001)
  • Ishikawa, R., Kojima, C., Ono, A. & Kainosho, M. Developing model systems for the NMR study of substituent effects on the N-H center dot center dot center dot N hydrogen bond in duplex DNA. Magn Reson Chem 39, S159-S165 (2001)
  • Detken, A., Hardy, E. H., Ernst, M., Kainosho, M., Kawakami, T., Aimoto, S. & Meier, B. H. Methods for sequential resonance assignment in solid, uniformly C-13, N-15 labelled peptides: Quantification and application to antamanide. J. Biomol. NMR 20, 203-221 (2001)
  • Bae, S. H., Cheong, H. K., Lee, J. H., Cheong, C., Kainosho, M. & Choi, B. S. Structural features of an influenza virus promoter and their implications for viral RNA synthesis. Proc. Natl. Acad. Sci. USA 98, 10602-10607 (2001)

2000

36. Yokoyama, S., Matsuo, Y., Hirota, H., Kigawa, T., Shirouzu, M., Kuroda, Y., Kurumizaka, H., Kawaguchi, S., Ito, Y., Shibata, T., Kainosho, M., Nishimura, Y., Inoue, Y. & Kuramitsu, S. (2000). Structural genomics projects in Japan. Prog Biophys Mol Bio 73, 363-376.

37. Utsunomiya-Tate, N., Kubo, K., Tate, S., Kainosho, M., Katayama, E., Nakajima, K. & Mikoshiba, K. (2000). Reelin molecules assemble together to form a large protein complex, which is inhibited by the function-blocking CR-50 antibody. Proc. Natl. Acad. Sci. USA 97, 9729-9734.

38. Tjandra, N., Tate, S., Ono, A., Kainosho, M. & Bax, A. (2000). The NMR structure of a DNA dodecamer in an aqueous dilute liquid crystalline phase. J. Am. Chem. Soc. 122, 6190-6200.

39. Tanaka, Y., Kojima, C., Yamazaki, T., Kodama, T. S., Yasuno, K., Miyashita, S., Ono, A., Kainosho, M. & Kyogoku, Y. (2000). Solution structure of an RNA duplex including a C-U base pair. Biochemistry 39, 7074-7080.

40. Pervushin, K., Fernandez, C., Riek, R., Ono, A., Kainosho, M. & Wuthrich, K. (2000). Determination of (h2)J(NN) and (h1)J(HN) coupling constants across Watson-Crick base pairs in the Antennapedia homeodomain-DNA complex using TROSY. J. Biomol. NMR 16, 39-46.

41. Nomura, K., Takegoshi, K., Terao, T., Uchida, K. & Kainosho, M. (2000). Three-dimensional structure determination of a uniformly labeled molecule by frequency-selective dipolar recoupling under magic-angle spinning. J. Biomol. NMR 17, 111-123.

42. Miyake, Y., Minami, T., Kikuchi, K., Kainosho, M. & Achiba, Y. (2000).

43. Kojima, C., Ono, A. & Kainosho, M. (2000). Studies of physicochemical properties of N-H center dot center dot center dot N hydrogen bonds in DNA, using selective N-15-labeling and direct N-15 1D NMR. J. Biomol. NMR 18, 269-277.

44. Kojima, C. & Kainosho, M. (2000). Simple suppression of spurious peaks in TROSY experiments. J. Magn. Reson. 143, 417-422.

45. Kariya, E., Ohki, S., Hayano, T. & Kainosho, M. (2000). Backbone H-1, C-13, and N-15 resonance assignments of an 18.2 kDa protein, E-coli peptidyl-prolyl cis-trans isomerase b (EPPIb). J. Biomol. NMR 18, 75-76.

1999

46. Szyperski, T., Fernandez, C., Ono, A., Wuthrich, K. & Kainosho, M. (1999). The 2D {P-31} spin-echo-difference constant-time [C-13, H-1]-HMQC experiment for simultaneous determination of (3)J(H3 ' P) and (3)J(C4 ' P) in C-13-labeled nucleic acids and their protein complexes. J. Magn. Reson. 140, 491-494.

47. Sasakawa, H., Tamura, A., Akasaka, K., Taguchi, S., Miyake, Y. & Kainosho, M. (1999). Backbone H-1, C-13, and N-15 resonance assignments of Streptomyces subtilisin inhibitor. J. Biomol. NMR 14, 285-286.

48. Oba, M., Miyakawa, A., Nishiyama, K., Terauchi, T. & Kainosho, M. (1999). Stereodivergent synthesis of (2S,3S,4R,5R)- and (2S,3S,4R,5S)-[3,4,5-D-3]proline depending on the substituent of the gamma-lactam ring. J. Org. Chem. 64, 9275-9278.

49. Nomura, K., Takegoshi, K., Terao, T., Uchida, K. & Kainosho, M. (1999). Determination of the complete structure of a uniformly labeled molecule by rotational resonance solid-state NMR in the tilted rotating frame. J. Am. Chem. Soc. 121, 4064-4065.

50. Mine, S., Tate, S., Ueda, T., Kainosho, M. & Imoto, T. (1999). Analysis of the relationship between enzyme activity and its internal motion using nuclear magnetic resonance: N-15 relaxation studies of wild-type and mutant lysozyme. J. Mol. Biol. 286, 1547-1565.

51. Kojima, C., Ono, A., Kainosho, M. & James, T. L. (1999). Quantitative measurement of transverse and longitudinal cross-correlation between C-13-H-1 dipolar interaction and C-13 chemical shift anisotropy: Application to a C-13-labeled DNA duplex. J. Magn. Reson. 136, 169-175.

52. Kishimoto, Y., Eckerle, P., Miyatake, T., Kainosho, M., Ono, A., Ikariya, T. & Noyori, R. (1999). Well-controlled polymerization of phenylacetylenes with organorhodium(I) complexes: Mechanism and structure of the polyenes. J. Am. Chem. Soc. 121, 12035-12044.

53. Hiraga, K., Seeram, S. S., Tate, S., Tanaka, N., Kainosho, M. & Oda, K. (1999). Mutational analysis of the reactive site loop of Streptomyces metalloproteinase inhibitor, SMPI. Journal of Biochemistry 125, 202-209.

54. Fernandez, C., Szyperski, T., Billeter, M., Ono, A., Iwai, H., Kainosho, M. & Wuthrich, K. (1999). Conformational changes of the BS2 operator DNA upon complex formation with the Antennapedia homeodomain studied by NMR with C-13/N-15-labeled DNA. J. Mol. Biol. 292, 609-617.

1998

55. Yabuki, T., Kigawa, T., Dohmae, N., Takio, K., Terada, T., Ito, Y., Laue, E. D., Cooper, J. A., Kainosho, M. & Yokoyama, S. (1998). Dual amino acid-selective and site-directed stable-isotope labeling of the human c-Ha-Ras protein by cell-free synthesis. J. Biomol. NMR 11, 295-306.

56. Tate, S., Ohno, A., Seeram, S. S., Hiraga, K., Oda, K. & Kainosho, M. (1998). Elucidation of the mode of interaction of thermolysin with a proteinaceous metalloproteinase inhibitor, SMPI, based on a model complex structure and a structural dynamics analysis. J. Mol. Biol. 282, 435-446.

57. Tanaka, T., Saha, S. K., Tomomori, C., Ishima, R., Liu, D. J., Tong, K. I., Park, H., Dutta, R., Qin, L., Swindells, M. B., Yamazaki, T., Ono, A. M., Kainosho, M., Inouye, M. & Ikura, M. (1998). NMR structure of the histidine kinase domain of the E-coli osmosensor EnvZ. Nature 396, 88-92.

58. Tanaka, T., Ames, J. B., Kainosho, M., Stryer, L. & Ikura, M. (1998). Differential isotope labeling strategy for determining the structure of myristoylated recoverin by NMR spectroscopy. J. Biomol. NMR 11, 135-152.

59. Szyperski, T., Fernandez, C., Ono, A., Kainosho, M. & Wuthrich, K. (1998). Measurement of deoxyribose (3)J(HH) scalar couplings reveals protein binding-induced changes in the sugar puckers of the DNA. J. Am. Chem. Soc. 120, 821-822.

60. Pervushin, K., Ono, A., Fernandez, C., Szyperski, T., Kainosho, M. & Wuthrich, K. (1998). NMR scaler couplings across Watson-Crick base pair hydrogen bonds in DNA observed by transverse relaxation optimized spectroscopy. Proc. Natl. Acad. Sci. USA 95, 14147-14151.

61. Oogo, Y., Ono, A. & Kainosho, M. (1998). Synthesis of [5 '-H-2(1)]-nucleosides with defined (5 ' S)/(5 ' R)-ratios. Tetrahedron Lett. 39, 2873-2876.

62. Ono, A., Shiina, T. & Kainosho, M. (1998). Systematic synthesis of specifically C-13/H-2-labeled nucleosides from [ul-C-13(6)]-D-Glucose. Tetrahedron Lett. 39, 2793-2796.

63. Ohno, A., Tate, S., Seeram, S. S., Hiraga, K., Swindells, M. B., Oda, K. & Kainosho, M. (1998). NMR structure of the Streptomyces metalloproteinase inhibitor, SMPI, isolated from Streptomyces nigrescens TK-23: Another example of an ancestral beta gamma-crystallin precursor structure. J. Mol. Biol. 282, 421-433.

64. Kojima, C., Ono, A., Kainosho, M. & James, T. L. (1998). DNA duplex dynamics: NMR relaxation studies of a decamer with uniformly C-13-labeled purine nucleotides. J. Magn. Reson. 135, 310-333.

65. Kojima, C., Kawashima, E., Toyama, K., Ohshima, K., Ishido, Y., Kainosho, M. & Kyogoku, Y. (1998). Stereospecific assignment of H5 ' and H5 in a (5 ' R)-/(5 ' S)-deuterium-labeled DNA decamer for (3)J(HH) determination and unambiguous NOE assignments. J. Biomol. NMR 11, 103-109.

66. Ishii, Y., Hirao, K., Terao, T., Terauchi, T., Oba, M., Nishiyama, K. & Kainosho, M. (1998). Determination of peptide phi angles in solids by relayed anisotropy correlation NMR. Solid State Nuclear Magnetic Resonance 11, 169-175.

67. Fernandez, C., Szyperski, T., Ono, A., Iwai, H., Tate, S., Kainosho, M. & Wuthrich, K. (1998). NMR with C-13, N-15-doubly-labeled DNA: The Antennapedia homeodomain complex with a 14-mer DNA duplex. J. Biomol. NMR 12, 25-37.

68. Akashi, S., Takio, K., Matsui, H., Tate, S. & Kainosho, M. (1998). Collision-induced dissociation spectra obtained by Fourier transform ion cyclotron resonance mass spectrometry using a C-13, N-15-doubly depleted protein. Anal Chem 70, 3333-3336.

1997

69. Szyperski, T., Ono, A., Fernandez, C., Iwai, H., Tate, S., Wuthrich, K. & Kainosho, M. (1997). Measurement of (3)J(C2'P) scalar couplings in a 17 kDa protein complex with C-13,N-15-Labeled DNA distinguishes the B-I and B-II phosphate conformations of the DNA. J. Am. Chem. Soc. 119, 9901-9902.

70. Ono, A. M., Ono, A. & Kainosho, M. (1997). Synthesis of (5'S)-[5'-H-2(1);1',2',3',4',5'-C-13(5)]-thymidine via stereoselective deuteration of a 5-oxoribose derivative. Tetrahedron Lett. 38, 395-398.

71. Kim, I., Muto, Y., Inoue, M., Watanabe, S., Kitamura, A., Yokoyama, S., Hosono, K., Takaku, H., Ono, A., Kainosho, M., Sakamoto, H. & Shimura, Y. (1997). NMR analysis of the hydrogen bonding interactions of the RNA-binding domains of the Drosophila Sex-lethal protein with target RNA fragments with site-specific [3-N-15]uridine substitutions. Nucleic Acids Res. 25, 1565-1569.

72. Kawashima, E., Toyama, K., Ohshima, K., Kainosho, M., Kyogoku, Y. & Ishido, Y. (1997). Novel approach to diastereoselective synthesis of 2'-deoxy[5'-H-2(1)]ribonucleoside derivatives by reduction of the corresponding 5'-O-acetyl-2'-deoxy-5'-phenylselenoribonucleoside derivatives with a (Bu3SnH)-H-2-Et3B system. Chirality 9, 435-442.

73. Kainosho, M., Ono, A. M., Tate, S. & Ono, A. (1997). Nmr spectroscopy of nucleic acids. FASEB J. 11, 1549.

74. Kainosho, M. (1997). Isotope labelling of macromolecules for structural determinations. Nat. Struct. Biol. 4, 858-861.


1996

75. Ono, A., Makita, T., Tate, S. I., Kawashima, E., Ishido, Y. & Kainosho, M. (1996). C5' methylene proton signal assignment of DNA/RNA oligomers labeled with C5'-monodeuterated nucleosides by H-1-P-31 HSQC spectroscopy. Magn Reson Chem 34, S40-S46.

76. Miyake, Y., Suzuki, S., Kojima, Y., Kikuchi, K., Kobayashi, K., Nagase, S., Kainosho, M., Achiba, Y., Maniwa, Y. & Fisher, K. (1996). Motion of scandium ions in Sc2C84 observed by Sc-45 solution NMR. Journal of Physical Chemistry 100, 9579-9581.

77. Ishii, Y., Terao, T. & Kainosho, M. (1996). Relayed anisotropy correlation NMR: Determination of dihedral angles in solids. Chem Phys Lett 256, 133-140.

1995

78. Tate, S., Ushioda, T., Utsunomiyatate, N., Shibuya, K., Ohyama, Y., Nakano, Y., Kaji, H., Inagaki, F., Samejima, T. & Kainosho, M. (1995). Solution Structure Of A Human Cystatin-A Variant, Cystatin-A(2-98) M65l, By Nmr-Spectroscopy - A Possible Role Of The Interactions Between The N-Termini And C-Termini To Maintain The Inhibitory Active Form Of Cystatin-A. Biochemistry 34, 14637-14648.

79. Tate, S., Ono, A. & Kainosho, M. (1995). Sequential Backbone Assignment In C-13-Labeled Dna By The H-1, C-13, P-31 Triple-Resonance Experiment, Hcp-Cch-Cosy. J Magn Reson Ser B 106, 89-91.

80. Tate, S., Kubo, Y., Ono, A. & Kainosho, M. (1995). Stereospecific Measurements Of The Vicinal H-1-P-31 Coupling-Constants For The Diastereotopic C5' Methylene Protons In A Dna Dodecamer With A C-13/H-2 Doubly Labeled Residue - Conformational-Analysis Of The Torsion Angle-Beta. J. Am. Chem. Soc. 117, 7277-7278.

81. Shibuya, K., Kaji, H., Ohyama, Y., Tate, S., Kainosho, M., Inagaki, F. & Samejima, T. (1995). Significance Of The Highly Conserved Gly-4 Residue In Human Cystatin-A. Journal Of Biochemistry 118, 635-642.

82. Schmidt, J. M., Ernst, R. R., Aimoto, S. & Kainosho, M. (1995). Determination Of Heteronuclear 3-Bond J-Coupling Constants In Peptides By A Simple Heteronuclear Relayed E.Cosy Experiment. J. Biomol. Nmr 6, 95-105.

83. Sakashita, H., Sakuma, T., Akitomo, Y., Ohkubo, T., Kainosho, M., Sekiguchi, M. & Morikawa, K. (1995). Methylation Dependent Functional Switch Mechanism Of The Escherichia-Coli Ada Protein. Proceedings Of The Japan Academy Series B-Physical And Biological Sciences 71, 198-201.

84. Sakashita, H., Sakuma, T., Akitomo, Y., Ohkubo, T., Kainosho, M., Sekiguchi, M. & Morikawa, K. (1995). Sequence-Specific Dna Recognition Of The Escherichia-Coli Ada Protein Associated With The Methylation-Dependent Functional Switch For Transcriptional Regulation. Journal Of Biochemistry 118, 1184-1191.

85. Oba, M., Ueno, R., Fukuoka, M., Kainosho, M. & Nishiyama, K. (1995). Synthesis Of L-Threo-[1-C-13,2,3-H-2(2)]Amino-Acid And L-Erythro-[1-C-13,2,3-H-2(2)]Amino-Acid - Novel Probes For Conformational-Analysis Of Peptide Side-Chains. Journal Of The Chemical Society-Perkin Transactions 1, 1603-1609.

86. Lee, W., Revington, M., Farrow, N. A., Nakamura, A., Utsunomiyatate, N., Miyake, Y., Kainosho, M. & Arrowsmith, C. H. (1995). Rapid Corepressor Exchange From The Trp-Repressor/Operator Complex - An Nmr-Study Of [Ul-C-13/N-15]-L-Tryptophan. J. Biomol. Nmr 5, 367-375.

87. Kawashima, E., Toyama, K., Ohshima, K., Kainosho, M., Kyogoku, Y. & Ishido, Y. (1995). Novel Synthesis Of 2'-Deoxy[5'-H-2]Ribonucleoside Derivatives From 5'-O-Ac-2'-Deoxy-5'-Phse-Ribonucleoside Derivatives. Tetrahedron Lett. 36, 6699-6700.

88. Kawashima, E., Aoyama, Y., Sekine, T., Miyahara, M., Radwan, M. F., Nakamura, E., Kainosho, M., Kyogoku, Y. & Ishido, Y. (1995). Sonochemical And Triethylborane-Induced Tin Deuteride Reduction For The Highly Diastereoselective Synthesis Of (2'r)-2'-Deoxy[2'-H-2]Ribonucleoside Derivatives. J. Org. Chem. 60, 6980-6986.

89. Kawashima, E., Aoyama, Y., Radwan, M. F., Miyahara, M., Sekine, T., Kainosho, M., Kyogoku, Y. & Ishido, Y. (1995).

90. Fujiwara, T., Sugase, K., Kainosho, M., Ono, A. & Akutsu, H. (1995). C-13-C-13 And C-13-N-15 Dipolar Correlation Nmr Of Uniformly Labeled Organic-Solids For The Complete Assignment Of Their C-13 And N-15 Signals - An Application To Adenosine. J. Am. Chem. Soc. 117, 11351-11352.

1994

91. Tsuboi, M., Ueda, T., Ushizawa, K., Sasatake, Y., Ono, A., Kainosho, M. & Ishido, Y. (1994). Assignments Of The Deoxyribose Vibrations - Isotopic Thymidine. Bulletin Of The Chemical Society Of Japan 67, 1483-1484.

92. Tate, S., Ono, A. & Kainosho, M. (1994). An Alternative Triple-Resonance Method For The Through-Bond Correlation Of Intranucleotide H1' And H8 Nmr Signals Of Purine Nucleotides - Application To A Dna Dodecamer With Fully C-13/N-15-Labeled Deoxyadenosine Residues. J. Am. Chem. Soc. 116, 5977-5978.

93. Sakashita, H., Ohkubo, T., Sakuma, T., Kainosho, M., Sekiguchi, M. & Morikawa, K. (1994). Methylation-Dependent Switch Mechanism Of The Escherichia-Coli Ada Protein. Protein Eng 7, 1153-1153.

94. Ono, A., Tate, S., Ishido, Y. & Kainosho, M. (1994). Preparation And Heteronuclear 2d Nmr-Spectroscopy Of A Dna Dodecamer Containing A Thymidine Residue With A Uniformly C-13-Labeled Deoxyribose Ring. J. Biomol. Nmr 4, 581-586.

95. Ohkubo, T., Sakashita, H., Sakuma, T., Kainosho, M., Sekiguchi, M. & Morikawa, K. (1994). Methylation Dependent Functional Switch Mechanism Newly Found In The Escherichia-Coli Ada Protein. J. Am. Chem. Soc. 116, 6035-6036.

96. Nishiyama, K., Oba, M., Ueno, R., Morita, A., Nakamura, Y. & Kainosho, M. (1994). Synthesis Of Phenylalanines Regiospecifically Labeled With Deuterium In The Aromatic Ring. Journal Of Labelled Compounds & Radiopharmaceuticals 34, 831-837.

97. Nakagawa, A., Takahashi, S., Uchida, K., Matsuzaki, K., Omura, S., Nakamura, A., Kurihara, N., Nakamatsu, T., Miyake, Y., Take, K. & Kainosho, M. (1994). Biosynthesis Of Lactacystin - Origin Of The Carbons And Stereospecific Nmr Assignment Of The 2 Diastereotopic Methyl-Groups. Tetrahedron Lett. 35, 5009-5012.

98. Nakagawa, A., Kainosho, M. & Omura, S. (1994).

99. Kijima, M., Yamashita, H., Kainosho, M. & Sato, T. (1994). A Novel Oxygenative Carbon-Carbon Bond-Cleavage Reaction By Irradiation Of Alkylcobaloximes Having A Phenyl Group At The Beta-Position. J. Org. Chem. 59, 6748-6752.

1993

100. Wang, J. F., Hinck, A. P., Kainosho, M. & Markley, J. L. (1993). Determination Of The Solution Structure Of Staphylococcal Nuclease-H124l. J. Cell. Biochem., 303-303.

101. Seigneuret, M. & Kainosho, M. (1993). Localization Of Methionine Residues In Bacteriorhodopsin By Carbonyl C-13-Nmr With Sequence-Specific Assignments. Febs Lett. 327, 7-12.

102. Sakashita, H., Sakuma, T., Ohkubo, T., Kainosho, M., Sakumi, K., Sekiguchi, M. & Morikawa, K. (1993). Folding Topology And Dna-Binding Of The N-Terminal Fragment Of Ada Protein. Febs Lett. 323, 252-256.

103. Kawashima, E., Aoyama, Y., Sekine, T., Nakamura, E., Kainosho, M., Kyogoku, Y. & Ishido, Y. (1993). Sonochemical And Triethylborane-Induced Tin Deuteride Reduction For The Highly Stereoselective Synthesis Of (2'r)-[2'-H-2]-2'-Deoxyribonucleosides From 2'-Functionalized Ribonucleosides. Tetrahedron Lett. 34, 1317-1320.

1992

104. Kikuchi, K., Nakahara, N., Wakabayashi, T., Suzuki, S., Shiromaru, H., Miyake, Y., Saito, K., Ikemoto, I., Kainosho, M. & Achiba, Y. (1992). Nmr Characterization Of Isomers Of C-78, C-82 And C-84 Fullerenes. Nature 357, 142-145.

1991

105. Uchida, K. & Kainosho, M. (1991). Synthesis Of [1,1'-C-13(2)]-L-Cystine. Journal Of Labelled Compounds & Radiopharmaceuticals 29, 867-874.

106. Higashijima, T., Graziano, M. P., Suga, H., Kainosho, M. & Gilman, A. G. (1991). F-19 And P-31 Nmr-Spectroscopy Of G-Protein Alpha-Subunits - Mechanism Of Activation By Al3+ And F. J. Biol. Chem. 266, 3396-3401.

107. Achiba, Y., Nakagawa, T., Matsui, Y., Suzuki, S., Shiromaru, H., Yamauchi, K., Nishiyama, K., Kainosho, M., Hoshi, H., Maruyama, Y. & Mitani, T. (1991). Visible, Uv, And Vuv Absorption-Spectra Of C-60 Thin-Films Grown By The Molecular-Beam Epitaxy (Mbe) Technique. Chemistry Letters, 1233-1236.

1989

108. Oda, K., Fukuda, Y., Murao, S., Uchida, K. & Kainosho, M. (1989). A Novel Proteinase-Inhibitor, Tyrostatin, Inhibiting Some Pepstatin-Insensitive Carboxyl Proteinases. Agric. Biol. Chem. 53, 405-415.

109. Kato, K., Matsunaga, C., Nishimura, Y., Waelchli, M., Kainosho, M. & Arata, Y. (1989). Application Of C-13 Nuclear Magnetic-Resonance Spectroscopy To Molecular Structural-Analyses Of Antibody Molecules. Journal Of Biochemistry 105, 867-869.

1988

110. Westler, W. M., Kainosho, M., Nagao, H., Tomonaga, N. & Markley, J. L. (1988). Two-Dimensional Nmr Strategies For Carbon Carbon Correlations And Sequence-Specific Assignments In C-13 Labeled Proteins. J. Am. Chem. Soc. 110, 4093-4095.

111. Kainosho, M. & Miyake, Y. (1988). Structural Study Of Ssi-Subtilisin Complexes By Means Of Stable Isotope Aided Nmr-Spectroscopy. Nippon Nogeikagaku Kaishi-Journal Of The Japan Society For Bioscience Biotechnology And Agrochemistry 62, 1822-1827.

112. Akasaka, K., Inoue, T., Tamura, A., Watari, H., Abe, K. & Kainosho, M. (1988). Internal Motion Of A Tryptophan Residue In Streptomyces Subtilisin Inhibitor - Deuterium Nuclear Magnetic-Resonance In Solution. Proteins-Structure Function And Genetics 4, 131-136.

1987

113. Kainosho, M., Nagao, H. & Tsuji, T. (1987). Local Structural Features Around The C-Terminal Segment Of Streptomyces Subtilisin Inhibitor Studied By Carbonyl Carbon Nuclear Magnetic Resonances Of 3 Phenylalanyl Residues. Biochemistry 26, 1068-1075.

1986

114. Arai, M., Sumida, M., Fukuhara, K., Kainosho, M. & Murao, S. (1986). Isolation And Characterization Of Amylase Inhibitors, (Glucose)N.Deoxynojirimycin. Agric. Biol. Chem. 50, 639-644.

1985

115. Sato, T., Wada, T., Komeichi, Y. & Kainosho, M. (1985). Electron-Organic Chemistry .9. Stereochemical Control In Electron-Transfer Induced Reactions - Cyclic Voltammetry And Cathodic Reduction Of Epimeric 3-Halogeno-6-Nitro-5-Cholestenes. Bulletin Of The Chemical Society Of Japan 58, 1452-1457.

116. Kainosho, M., Nagao, H., Imamura, Y., Uchida, K., Tomonaga, N., Nakamura, Y. & Tsuji, T. (1985). Structural Studies Of A Protein Using The Assigned Back-Bone Carbonyl C-13 Nmr Resonances. J. Mol. Struct. 126, 549-562.

1982

117. Uesugi, S., Nakagawa, E., Ohtsuka, E., Ikehara, M., Watanabe, M., Kobayashi, Y., Kyogoku, Y. & Kainosho, M. (1982). Unambiguous Assignments Of The Imino Proton Resonances Of A G-U Wobble Base Pair. J. Am. Chem. Soc. 104, 7340-7341.

118. Kyogoku, Y., Watanabe, M., Kainosho, M. & Oshima, T. (1982). A N-15-Nmr Study On Ribonuclease T1-Guanylic Acid Complex. Journal Of Biochemistry 91, 675-679.

119. Kainosho, M. & Tsuji, T. (1982). Assignment Of The 3 Methionyl Carbonyl Carbon Resonances In Streptomyces Subtilisin Inhibitor By A C-13 And N-15 Double-Labeling Technique - A New Strategy For Structural Studies Of Proteins In Solution. Biochemistry 21, 6273-6279.

120. Harada, I., Takeuchi, H., Tasumi, M., Tsuji, T. & Kainosho, M. (1982). Raman-Spectroscopic Study Of Streptomyces Subtilisin Inhibitor. Journal Of Raman Spectroscopy 13, 276-279.

121. Akasaka, K., Hatano, H., Tsuji, T. & Kainosho, M. (1982). Proton Magnetic-Resonance Study Of The Tryptophan Residue Of Streptomyces Subtilisin Inhibitor. Biochimica Et Biophysica Acta 704, 503-508.

1981

122. Watanabe, M., Sugeta, H., Iwahashi, H., Kyogoku, Y. & Kainosho, M. (1981). Detection Of Proton-Acceptor Sites Of Hydrogen-Bonding In Adenine . Uracil Base-Pairs By The Use Of N-15 Magnetic-Resonance. Eur. J. Biochem. 117, 553-558.

123. Nakazawa, H., Ajisaka, K., Kainosho, M., Sawada, S. & Yamada, H. (1981). Stereochemistry Of Decarboxylation Reactions Catalyzed By A Constitutive Aromatic L-Amino-Acid Decarboxylase. Agric. Biol. Chem. 45, 2553-2557.

124. Kainosho, M. & Tsuji, T. (1981). Dihedral-Angle Dependence Of The Vicinal N-15,C-13 Spin-Coupling Constants - A New Nmr Parameter For The Conformational-Analysis Of Amino-Acids And Peptides. Organic Magnetic Resonance 17, 46-49.

1980

125. Kyogoku, Y., Watanabe, M., Kainosho, M. & Oshima, T. (1980). N-15-Nmr Study On Ribonuclease T1-Guanylic Acid Complex. Studia Biophysica 81, 123-124.

1979

126. Takeuchi, Y., Murai, A., Takahara, Y. & Kainosho, M. (1979). Structure Of Permetin-A, A New Polypeptin Type Antibiotic Produced By Bacillus-Circulans. J. Antibiot. 32, 121-129.

127. Murai, A., Kainosho, M., Takeuchi, Y., Kato, T. & Kimizuka, A. (1979). New Strategy In Food Analysis Using Liquid-Chromatography And C-13 Nmr-Spectroscopy. Abstracts Of Papers Of The American Chemical Society, 14-14.

128. Kainosho, M., Ajisaka, K., Sawada, S., Tanokura, M. & Miyazawa, T. (1979). Assignment Of Beta-Proton Resonances Of L-Histidine By Stereoselective Deuterium Substitution. Chemistry Letters, 395-396.

129. Kainosho, M. (1979). Caution In Using N-15-C-13 Spin-Spin Coupling For Determining (Bio)Synthetic Pathways. J. Am. Chem. Soc. 101, 1031-1032.

130. Kainosho, M. (1979). Assignments Of C-13 Nmr-Spectra Of Cyclic-Nucleotides. Organic Magnetic Resonance 12, 548-550.

1978

131. Kainosho, M., Kroon, P. A., Lawaczeck, R., Petersen, N. O. & Chan, S. I. (1978). Chainlength Dependence Of H-1 Nmr Relaxation Rates In Bilayer Vesicles. Chemistry And Physics Of Lipids 21, 59-68.

132. Kainosho, M. & Ajisaka, K. (1978). C-13 Nuclear Magnetic-Resonance Spectra Of Gross Plant-Tissues Containing Starch. Tetrahedron Lett., 1563-1566.

1977

133. Lawaczeck, R., Blackman, R. & Kainosho, M. (1977). Ion Permeation Across Bilayer Of Annealed Phosphatidylcholine Vesicles At Elevated-Temperatures - Concentration-Dependence And Micelle-Bilayer Dynamic Equilibrium. Biochimica Et Biophysica Acta 468, 411-422.

134. Kung, W. J., Marsh, R. E. & Kainosho, M. (1977). Crystal And Solution Structure Of 2',5'-Arabinosylcytidine Monophosphate - Influence Of Poc Bond Angles On Proton-Phosphorus Vicinal Coupling-Constants In P-O-C-H Fragments. J. Am. Chem. Soc. 99, 5471-5477.

135. Kainosho, M., Ajisaka, K. & Nakazawa, H. (1977). Insitu Analysis Of Microbial Fermentation Process By Natural Abundance C-13 And P-31 Nmr-Spectroscopy Production Of Adenosine-5'-Triphosphate From Adenosine. Febs Lett. 80, 385-389.

1976

136. Murai, A. & Kainosho, M. (1976). Hydrogen Rearrangements In Cyclic Phosphates During Electron Impact-Induced Fragmentation. Organic Mass Spectrometry 11, 175-182.

137. Lawaczeck, R., Kainosho, M. & Chan, S. I. (1976). Formation And Annealing Of Structural Defects In Lipid Bilayer Vesicles. Biochimica Et Biophysica Acta 443, 313-330.

138. Kroon, P. A., Kainosho, M. & Chan, S. I. (1976). Proton Magnetic-Resonance Studies Of Lipid Bilayer Membranes - Experimental-Determination Of Intermolecular And Intramolecular Nuclear-Relaxation Rates In Sonicated Phosphatidylcholine Bilayer Vesicles. Biochimica Et Biophysica Acta 433, 282-293.

139. Kainosho, M. & Konishi, H. (1976). C-13 Nuclear Magnetic-Resonance Spectrum Of Dried Star Anise Fruits And Its Histological Implications. Tetrahedron Lett., 4757-4760.

140. Kainosho, M. (1976). C-13 Nmr-Studies Of Intact Plant-Tissues - Cytoplasmic Aucubin And Sucrose In A Single Seed Of Aucuba-Japonica. Tetrahedron Lett., 4279-4282.

1975

141. Petersen, N. O., Kroon, P. A., Kainosho, M. & Chan, S. I. (1975). Thermal Phase-Transitions In Deuterated Lecithin Bilayers. Chemistry And Physics Of Lipids 14, 343-349.

142. Lichtenberg, D., Petersen, N. O., Girardet, J. L., Kainosho, M., Kroon, P. A., Seiter, C. H. A., Feigenson, G. W. & Chan, S. I. (1975). Interpretation Of Proton Magnetic-Resonance Linewidths For Lecithin Dispersions - Effect Of Particle-Size And Chain Packing. Biochimica Et Biophysica Acta 382, 10-21.

143. Lawaczeck, R., Kainosho, M., Girardet, J. L. & Chan, S. I. (1975). Effects Of Structural Defects In Sonicated Phospholipid Vesicles On Fusion And Ion Permeability. Nature 256, 584-586.

144. Kroon, P. A., Kainosho, M. & Chan, S. I. (1975). State Of Molecular-Motion Of Cholesterol In Lecithin Bilayers. Nature 256, 582-584.

145. Kainosho, M., Ajisaka, K., Kamisaku, M., Murai, A. & Kyogoku, Y. (1975). Conformational-Analysis Of Amino-Acids And Peptides Using Specific Isotope Substitution .1. Conformation Of L-Phenylalanylglycine. Biochem. Biophys. Res. Commun. 64, 425-432.

146. Kainosho, M. & Ajisaka, K. (1975). Conformational-Analysis Of Amino-Acids And Peptides Using Specific Isotope Substitution .2. Conformation Of Serine, Tyrosine, Phenylalanine, Aspartic-Acid, Asparagine, And Aspartic-Acid Beta-Methyl Ester In Various Ionization States. J. Am. Chem. Soc. 97, 5630-5631.

147. Kainosho, M. & Ajisaka, K. (1975). Conformational Study Of Cyclic Nucleotides - Lanthanide Ion Assisted Analysis Of Hydrogen-1 Nuclear Magnetic-Resonance Spectra. J. Am. Chem. Soc. 97, 6839-6843.

148. Ajisaka, K. & Kainosho, M. (1975). Gd(Fod)3-Induced Contact Shifts - Versatile New Method To Estimate Contact And Pseudocontact Shift Contributions To Observed Lanthanide-Induced Shifts. J. Am. Chem. Soc. 97, 330-334.

149. Ajisaka, K. & Kainosho, M. (1975). Diastereomeric Interaction Of Partially Resolved Amines Facilitated By Lanthanide Chelates - Evidence For Dynamic Equilibrium Between 7-Coordinate And 8-Coordinate Alkylamine-Lanthanide Chelate Adducts. J. Am. Chem. Soc. 97, 1761-1765.

1974

150. Sato, T., Takemura, T. & Kainosho, M. (1974). C-13 Nuclear Magnetic-Resonance Spectra Of Strained Molecules - Diamagnetic And Paramagnetic Shifts Of Sterically Compressed Carbon Resonances In [2,2]Metacyclophanes. Journal Of The Chemical Society-Chemical Communications, 97-98.

1973

151. Tori, K., Yoshimur.Y, Kainosho, M. & Ajisaka, K. (1973). Evidence For Presence Of Contact Term Contribution To Lanthanide Induced Shifts In H-1 And C-13 Nmr-Spectra Of Pyridine N-Oxides. Tetrahedron Lett., 1573-1576.

152. Tori, K., Yoshimur.Y, Kainosho, M. & Ajisaka, K. (1973). Importance Of Complex-Formation And Contact Shifts In Application Of Lanthanide Shift Reagents To H-1 And C-13nmr Spectra Of Aromatic-Compounds. Tetrahedron Lett., 3127-3130.

153. Kainosho, M. & Ajisaka, K. (1973). Recent Progress Of Application Of Lanthanide Shift Reagents In Organic-Chemistry. Journal Of Synthetic Organic Chemistry Japan 31, 126-148.

154. Ajisaka, K., Kainosho, M., Shigemot.H, Tori, K., Wolkowsk.Zw & Yoshimur.Y. (1973). Conspicuous Effects Due To Complex-Formation And Contact Term Upon Lanthanide-Induced Shifts In 19-F Nmr Of Some Fluoroaromatic Compounds. Chemistry Letters, 1205-1208.

1972

155. Sato, T., Uno, K. & Kainosho, M. (1972). New Synthesis Of Bridged Aromatics - 10,15-Dihydro-5h-Tribenzo[A,D,G]Cyclononene And Its Analogs. Journal Of The Chemical Society-Chemical Communications, 579-&.

156. Matsuura, K., Ishido, Y., Kainosho, M. & Araki, Y. (1972). Synthetic Studies Of Carbohydrate Derivatives With Photochemical Reaction .5. Photochemical Reaction Of D-Glucal And 2-Hydroxy-D-Glucal Acetates With Lactonitrile. Chemistry Letters, 853-&. 157. Kainosho, M. & Kyogoku, Y. (1972). High-Resolution Proton And Phosphorus Nuclear Magnetic-Resonance Spectra Of Flavin-Adenine Dinucleotide And Its Conformation In Aqueous-Solution. Biochemistry 11, 741-&.

158. Kainosho, M., Beare, S. D., Ajisaka, K. & Pirkle, W. H. (1972). Use Of Chiral Solvents Or Lanthanide Shift Reagents To Distinguish Meso From D Or L Diastereomers. J. Am. Chem. Soc. 94, 5924-&.

159. Kainosho, M., Ajisaka, K. & Tori, K. (1972). Evidence For Presence Of Contact Term Contribution To Lanthanide-Induced Isotropic Shifts In C-13 And F-19 Nmr-Spectra Of Aliphatic-Compounds - Caution For Applications Of Lanthanide Shift Reagents. Chemistry Letters, 1061-1064.

160. Ajisaka, K., Kainosho, M. & Kamisaku, M. (1972). Enantiomeric Shift Difference Induced By Lanthanide Shift Reagent - Its Correlation With Absolute Configuration Of Alpha-Amino Acids. Chemistry Letters, 857-&.

1971

161. Sato, T., Wakabaya.M, Hata, K. & Kainosho, M. (1971). Medium-Sized Cyclophanes .12. Syntheses, Variable Temperature Pmr Spectra, And Conformational Aspects Of [M.N]Metacyclophane Sulfur Analogs - Effect Of Ring Size And Substitution On Conformation And Conformational Changes. Tetrahedron 27, 2737-&.

162. Iwashita, Y., Ishikawa, A. & Kainosho, M. (1971). Spectroscopic Study On Bond Hybridization Of Co-Ordinated Acetylenes. Spectrochimica Acta Part A-Molecular Spectroscopy A 27, 271-&.

163. Haga, K., Kainosho, M. & Yoshikaw.M. (1971). Studies Of Phosphorylation .5. Synthesis Of Inosine-5'-Thiophosphates. Bulletin Of The Chemical Society Of Japan 44, 460-&.

164. Akimoto, T., Tsuboi, M., Kainosho, M., Tamura, F., Nakamura, A., Muraishi, S. & Kajiura, T. (1971). Conformation Of Alpha-Aminobutyric Acid In Aqueous Solution. Bulletin Of The Chemical Society Of Japan 44, 2577-&.

1970

165. Kainosho, M. (1970). Phosphorus-Proton Spin-Spin Coupling Constants In Acyclic Phosphates. Journal Of Physical Chemistry 74, 2853-&.

1969

166. Tsuboi, M., Takahash.S, Kyogoku, Y., Hayatsu, H., Ukita, T. & Kainosho, M. (1969). Phosphorus-Proton Spin-Spin Coupling And Conformation Of A Dinucleoside Phosphate. Science 166, 1504-&.

167. Murayama, W. & Kainosho, M. (1969). Crystal Structure Of 5,5-Dimethyl-2-Oxo-2-Hydroxy-1,3,2-Dioxaphosphorinane Monohydrate. Bulletin Of The Chemical Society Of Japan 42, 1819-&.

168. Kainosho, M. & Shimozaw.T. (1969). Dipole Moment And Conformation Of 2,2-Disubstituted-1,3,2-Dioxaphosphorinanes. Tetrahedron Lett., 865-&.

169. Kainosho, M., Nakamura, A. & Tsuboi, M. (1969). Phosphorus-Proton Spin-Spin Coupling In P-O-C-H Group . A Comparison Of Cyclic And Acyclic Systems. Bulletin Of The Chemical Society Of Japan 42, 1713-&.

170. Kainosho, M. & Nakamura, A. (1969). Nuclear Magnetic Resonance Spectrum Of 2,7,8,-Trioxa-1-Phosphabicyclo [3.2.1] Octane - A Further Observation Of Through-Space Long-Range Coupling Constant. Tetrahedron 25, 4071-&.

171. Kainosho, M., Morofush.T & Nakamura, A. (1969). Conformational Dependence Of P=O Stretching Vibration Frequency In 6-Membered Cyclic Phosphates. Bulletin Of The Chemical Society Of Japan 42, 845-&.

172. Kainosho, M. (1969). Removal Of Spin-Spin Coupling By Addition Of Paramagnetic Metal Complexes. Journal Of Physical Chemistry 73, 3516-&.

1968

173. Sato, T., Wakabaya.M, Kainosho, M. & Hata, K. (1968). Conformational Changes In Sulfur Analogs Of 11- And 12-Membered Metacyclophanes. Tetrahedron Lett., 4185-&.

174. Sato, T., Akabori, S., Kainosho, M. & Hata, K. (1968). Medium-Sized Cyclophanes .6. High-Temperature Nmr Spectra Of [2.2]Metacyclophane And Optical Resolution Of 4,14-Disubstituted Derivatives. Bulletin Of The Chemical Society Of Japan 41, 218-&.

1967

  • Sato, T., Saito, Y., Kainosho, M. & Hata, K. (1967). A new Synthesis of dialkoxymethane. Magnetic nonequivalence of methylene protons in certain dialkoxymethane. Bulletin of the Chemical Society of Japan 40, 391-&.

1966

  • Sato, T., Akabori, S., Kainosho, M. & Hata, K. (1966). Medium-Sized Cyclophanes .2. Stereoselective synthesis and optical resolution of 4 14-dimethyl(2.2)Mmtacyclophane. Bulletin of the Chemical Society of Japan 39, 856-&.
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