Tutorials: Difference between revisions

From CYANA Wiki
Jump to navigation Jump to search
Line 6: Line 6:
   read upl demo.upl # read upper distance bounds
   read upl demo.upl # read upper distance bounds
   read aco demo.aco # read dihedral angle restraints
   read aco demo.aco # read dihedral angle restraints
 
 
   calc_all 50 steps=4000 # calculate conformers
   calc_all 50 steps=4000 # calculate conformers
 
 
   overview demo.ovw structures=10 pdb # analyze and write best conformers
   overview demo.ovw structures=10 pdb # analyze and write best conformers

Revision as of 12:51, 29 January 2009

Example calculations

Basic structure calculation

 read upl demo.upl			# read upper distance bounds
 read aco demo.aco			# read dihedral angle restraints
 
 calc_all 50 steps=4000		# calculate conformers
 
 overview demo.ovw structures=10 pdb	# analyze and write best conformers