CYANA Command: distances set: Difference between revisions

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== Description ==
== Description ==


This command sets properties of the distance restraints that match the
This command sets properties of the distance restraints that match the given ''selection''. By default, the selection made in the most recent '''distances select''' command is used, or all distance restraints if no selection has been made so far. The following properties that can be set:
selection ''string''. By default, the selection made in the most recent
'''distances select''' command is used, or all distance restraints if no
selection has been made so far.


Properties that can be set:
:; '''bound''' : Distance bound (in Å), which can be an arbitrary real expression that may contain the symbols '''distance''', '''distdev''', '''distmin''', and '''distmax''' to denote, respectively, the average value, the standard deviation, the minimal value, and the maximal value of the corresponding distance in the selected structures.
 
:; '''weight''' : Relative weight
* bound      distance bound, given in Angstrom
:; '''confine''' : Confinement limit for violation confinement (in Å)
* weight    relative weight
* confine    confinement limit for violation confinement, given in Angstrom
 
The value of '''bound''' parameter can be an arbitrary real expression that
may contain the symbols '''distance''', '''distdev''', '''distmin''', and '''distmax'''
to denote, respectively, the average value, the standard deviation,
the minimal value, and the the maximal value of the corresponding
distance in the selected structures.

Revision as of 14:32, 7 August 2009

Parameters

selection=string
(default: none)
bound=string
(default: none)
weight=string
(default: none)
confine=string
(default: none)

Description

This command sets properties of the distance restraints that match the given selection. By default, the selection made in the most recent distances select command is used, or all distance restraints if no selection has been made so far. The following properties that can be set:

bound
Distance bound (in Å), which can be an arbitrary real expression that may contain the symbols distance, distdev, distmin, and distmax to denote, respectively, the average value, the standard deviation, the minimal value, and the maximal value of the corresponding distance in the selected structures.
weight
Relative weight
confine
Confinement limit for violation confinement (in Å)
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