CYANA Command: atoms observable: Difference between revisions
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== Parameters == | == Parameters == | ||
; selection='' | ; selection=''[[atom selection]]'': (default: ''none'') | ||
; list=''string'': (default: ''none'') | ; list=''string'': (default: ''none'') | ||
== Description == | == Description == | ||
Select the atoms that can be observed in the peak list(s) specified by the '''list''' parameter. Assignments of NOESY peaks made by the [[CYANA Commands: assign|'''assign''']] command are restricted to such “observable” atoms. By default, the atom selection made in the most recent [[CYANA Commands: atoms select|'''atoms select''']] command is used, or all atoms if no selection has been made so far. The '''list''' parameter value is expected to be a <string> that can either denote a range of peak list indices (for example, “1..3” to choose the first three peak lists) or a name, possibly containing wildcards, that matches one or several peak list names. By default, all peak lists are selected. Initially, all atoms with an assigned chemical shift are considered as observable and will be used as possible assignments in the [[CYANA Commands: assign|'''assign''']] command. | |||
atoms that can be observed in the peak list(s) specified by the '''list''' | |||
parameter. Assignments of NOESY peaks made by the '''assign''' command are | |||
restricted to such | |||
made in the most recent '''atoms select''' command is used, or all atoms | |||
if no selection has been made so far. The '''list''' parameter value is | |||
expected to be a | |||
indices (for example, | |||
or a name, possibly containing wildcards, that matches one or several | |||
peak list names. By default, all peak lists are selected. Initially, | |||
all atoms with an assigned chemical shift are considered as observable | |||
and will be used as possible assignments in the '''assign''' command. | |||
== See also == | == See also == | ||
* [[assign]] | * [[CYANA Commands: assign|'''assign''']] | ||
Latest revision as of 10:50, 13 August 2009
Parameters
- selection=atom selection
- (default: none)
- list=string
- (default: none)
Description
Select the atoms that can be observed in the peak list(s) specified by the list parameter. Assignments of NOESY peaks made by the assign command are restricted to such “observable” atoms. By default, the atom selection made in the most recent atoms select command is used, or all atoms if no selection has been made so far. The list parameter value is expected to be a <string> that can either denote a range of peak list indices (for example, “1..3” to choose the first three peak lists) or a name, possibly containing wildcards, that matches one or several peak list names. By default, all peak lists are selected. Initially, all atoms with an assigned chemical shift are considered as observable and will be used as possible assignments in the assign command.