CYANA Command: couplings set: Difference between revisions

From CYANA Wiki
Jump to navigation Jump to search
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
== Parameters ==
== Parameters ==


; selection=''[[Scalar coupling selection]]'': (default: ''none'')
; selection=''[[scalar coupling selection]]'': (default: ''none'')
; value=''string'': (default: ''none'')
; value=''string'': (default: ''none'')
; tolerance=''string'': (default: ''none'')
; tolerance=''string'': (default: ''none'')
Line 11: Line 11:
Sets properties of the scalar coupling constant restraints that match the given ''selection''. By default, the selection made in the most recent [[CYANA Commands: couplings select|'''couplings select''']] command is used, or all scalar coupling constant restraints if no selection has been made so far.
Sets properties of the scalar coupling constant restraints that match the given ''selection''. By default, the selection made in the most recent [[CYANA Commands: couplings select|'''couplings select''']] command is used, or all scalar coupling constant restraints if no selection has been made so far.
The following properties can be set:
The following properties can be set:
:;value: scalar coupling constant value
;value: scalar coupling constant value
:;tolerance: scalar coupling constant tolerance
;tolerance: scalar coupling constant tolerance
:;weight: relative weight of the restraint
;weight: relative weight of the restraint
:;karpluscurve: Karplus curve, which must be given as ''A''+''B''*'''cos(d)'''+''C''*'''cos(d)**2''', where ''A'', ''B'' and ''C'' are real numbers, and '''d''' denotes the value of the torsion angle formed by the two scalar coupled atoms.
;karpluscurve: Karplus curve, which must be given as ''A'''''+'''''B'''''*cos(d)+'''''C'''''*cos(d)**2''', where ''A'', ''B'' and ''C'' are real numbers, and '''d''' denotes the value of the torsion angle formed by the two scalar coupled atoms.

Latest revision as of 14:49, 13 August 2009

Parameters

selection=scalar coupling selection
(default: none)
value=string
(default: none)
tolerance=string
(default: none)
weight=string
(default: none)
karpluscurve=string
(default: none)

Description

Sets properties of the scalar coupling constant restraints that match the given selection. By default, the selection made in the most recent couplings select command is used, or all scalar coupling constant restraints if no selection has been made so far. The following properties can be set:

value
scalar coupling constant value
tolerance
scalar coupling constant tolerance
weight
relative weight of the restraint
karpluscurve
Karplus curve, which must be given as A+B*cos(d)+C*cos(d)**2, where A, B and C are real numbers, and d denotes the value of the torsion angle formed by the two scalar coupled atoms.