Automated resonance assignment with FLYA (EMBO 2013): Difference between revisions

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* C(CO)NH, called 'C_CO_NH' in FLYA
* C(CO)NH, called 'C_CO_NH' in FLYA
* HC(CO)NH, called 'HC_CO_NH' in FLYA
* HC(CO)NH, called 'HC_CO_NH' in FLYA
Peak lists that have been prepared by automatic peak picking with the program NMRView are stored in files ''XXX''.peaks, where ''XXX'' denotes the FLYA spectrum type.

Revision as of 21:41, 21 July 2013

We want to determine the resonance assignments and the structure of a protein.

The protein sequence is stored in the file 'demo.seq'.

The following spectra have been measured:

  • [1H,13C]-HSQC, called 'C13H1' in FLYA
  • [1H,15N]-HSQC, called 'N15H1' in FLYA
  • HNCA
  • HN(CO)CA, called 'HN_CO_CA' in FLYA
  • HNCO
  • HN(CA)CO, called 'HN_CA_CO' in FLYA
  • CBCANH
  • CBCACONH
  • HBHACONH
  • HCCH-TOCSY, called 'HCCH24' in FLYA
  • HCCH-COSY, called 'HCCH7' in FLYA
  • C(CO)NH, called 'C_CO_NH' in FLYA
  • HC(CO)NH, called 'HC_CO_NH' in FLYA

Peak lists that have been prepared by automatic peak picking with the program NMRView are stored in files XXX.peaks, where XXX denotes the FLYA spectrum type.

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