CYANA Command: write seq: Difference between revisions

Write sequence file

write seq filename.seq

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 == Parameters ==
-; file=''filename''.seq
+;file=''filename''.seq
-:(required) The name of the output sequence file. The filename extension ".seq" is used unless a filename extension is given explicitly.
+:(required)
-; pure
+;list=''intege''
-: Option to write purely the residue names and residue numbers, excluding possible ''cis''-peptide bond declarations or '''link''' statements.
+:(default: 1)
-; append
+;nmrstar=''integer''
-: Option to append the output to the given file. By default, an already existing output file is overwritten.
+:(default: 2)
+;details
+;multiple
+;pure
+;append
 == Description ==
-Writes a file with the residue sequence.
+Writes a file with the residue sequence in the standard [[sequence file]] format of the program CYANA.
-Instead of the command '''write seq '''''filename'''''.seq''' a shorthand version '''write '''''filename'''''.seq'''can be used, provided that the default filename extension ".seq" is used.
+Instead of the command
+ write seq ''filename''.seq
+the shorthand version
+ write ''filename''.seq
+can be used if the filename extension is ".seq".

Latest revision as of 11:15, 12 January 2010