CYANA Macro: taloslist: Difference between revisions

From CYANA Wiki
Jump to navigation Jump to search
No edit summary
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
== Parameters ==
== Parameters ==


; file=''filename''.tab           (required)
; file=''filename''.tab: (required)


== Description ==
== Description ==


Writes a chemical shift list in the format used by TALOS+ (Shen et al., J. Biomol. NMR 44, 213-223 (2009)). The following is an example of a chemical shift list for TALOS+:
Writes a chemical shift list in the format used by TALOS+ (Shen et al., J. Biomol. NMR 44, 213-223 (2009)). This command is used by the [[CYANA Macro: talos|talos]] macro that generates angle restraints from chemical shifts.
 
== Example ==
 
The following is an example of a chemical shift list for TALOS+:


  REMARK Chemical shift list for TALOS
  REMARK Chemical shift list for TALOS
Line 26: Line 30:
   9 V    HA      3.91
   9 V    HA      3.91
   9 V    CB      29.85
   9 V    CB      29.85
== See also ==
* [[CYANA Macro: talos|talos]]

Latest revision as of 10:35, 1 August 2011

Parameters

file=filename.tab
(required)

Description

Writes a chemical shift list in the format used by TALOS+ (Shen et al., J. Biomol. NMR 44, 213-223 (2009)). This command is used by the talos macro that generates angle restraints from chemical shifts.

Example

The following is an example of a chemical shift list for TALOS+:

REMARK Chemical shift list for TALOS

DATA SEQUENCE GSSGSSGEVQ KPLHEQLWYH GAIPRAEVAE LLVHSGDFLV RESQGKQEYV
DATA SEQUENCE LSVLWDGLPR HFIIQSLDNL YRLEGEGFPS IPLLIDHLLS TQQPLTKKSG
DATA SEQUENCE VVLHRAVPSG PSSG

VARS   RESID RESNAME ATOMNAME SHIFT
FORMAT %4d   %1s     %4s      %8.3f

  8 E    N      121.23
  8 E    H        8.26
  8 E    CA      55.67
  8 E    HA       4.05
  8 E    CB      27.75
  9 V    N      117.96
  9 V    H        7.88
  9 V    CA      61.49
  9 V    HA       3.91
  9 V    CB      29.85

See also