CYANA Macro: cashiftaco: Difference between revisions

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== Parameters ==
== Parameters ==


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== Description ==
== Description ==


Generates restraints for the backbone dihedral angles f and y in proteins
Generates restraints for the backbone torsion angles and in proteins by comparing the chemical shifts with the corresponding random coil values (Spera & Bax, 1991). Angle restraints are derived according to the rules of (Luginbühl et al., 1995). The C random coil shifts are relative to internal TSP. Optionally, an offset  is added to the chemical shifts in the proton list. A warning is printed for C chemical shifts that deviate by more than 15 ppm from their random coil value.
by comparing the Ca chemical shifts with the corresponding random coil
values of Spera & Bax (1991). Angle restraints are derived according to
the rules of Luginbuehl et al. (1995). The Ca random coil shifts are
relative to internal TSP. Optionally, an offset Dw is added to the
chemical shifts in the proton list. A warning is printed for Ca chemical
shifts that deviate by more than 15 ppm from their random coil value.

Revision as of 14:46, 6 August 2009

Parameters

offset=real
(default: 0.0)
prooffset=real
(default: 2.0)

Description

Generates restraints for the backbone torsion angles  and  in proteins by comparing the Cα chemical shifts with the corresponding random coil values (Spera & Bax, 1991). Angle restraints are derived according to the rules of (Luginbühl et al., 1995). The C random coil shifts are relative to internal TSP. Optionally, an offset  is added to the chemical shifts in the proton list. A warning is printed for C chemical shifts that deviate by more than 15 ppm from their random coil value.