CYANA Command: write seq: Difference between revisions

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Writes a file with the residue sequence.
Writes a file with the residue sequence.


Instead of the command '''write seq '''''filename'''''.seq''' a shorthand version '''write '''''filename'''''.seq''' can be used, provided that the default filename extension ".seq" is used.
Instead of the command  
 
write seq ''filename''.seq''
 
a shorthand version  
 
write ''filename''.seq  
 
can be used, provided that the default filename extension ".seq" is used.

Revision as of 22:29, 3 February 2009

Write sequence file

Parameters

file=filename.seq
(required) The name of the output sequence file. The filename extension ".seq" is used unless a filename extension is given explicitly.
pure
Option to write purely the residue names and residue numbers, excluding possible cis-peptide bond declarations or link statements.
append
Option to append the output to the given file. By default, an already existing output file is overwritten.

Description

Writes a file with the residue sequence.

Instead of the command

write seq filename.seq

a shorthand version

write filename.seq 

can be used, provided that the default filename extension ".seq" is used.