CYANA Macro: kringle: Difference between revisions
Jump to navigation
Jump to search
No edit summary |
|||
| Line 7: | Line 7: | ||
== Description == | == Description == | ||
Produces a graphics output file with the given name (a Graf file if the extension is “.grf”, or a Postscript file otherwise) containing a plot of <sup>3</sup>''J''<sub>αβ2</sub> versus <sup>3</sup>''J''<sub>αβ3</sub> couplings (Nagayama & Wüthrich, 1981). The theoretical curve based on the Karplus equation given in the library is also drawn, both for a rigid structure (solid line) and for the situation when the χ<sup>1</sup> angle is uniformly distributed in the interval 'delta'' around a given value (dotted line). Optionally, '''errorbars''' can be shown for the coupling constant values. | Produces a graphics output file with the given name (a Graf file if the extension is “.grf”, or a Postscript file otherwise) containing a plot of <sup>3</sup>''J''<sub>αβ2</sub> versus <sup>3</sup>''J''<sub>αβ3</sub> couplings (Nagayama & Wüthrich, 1981). The theoretical curve based on the Karplus equation given in the library is also drawn, both for a rigid structure (solid line) and for the situation when the χ<sup>1</sup> angle is uniformly distributed in the interval ''delta'' around a given value (dotted line). Optionally, '''errorbars''' can be shown for the coupling constant values. | ||
Latest revision as of 17:20, 12 January 2010
Parameters
- file=filename.ps
- (default: kringle.ps)
- delta=real
- (default: 30.0)
- errorbars
Description
Produces a graphics output file with the given name (a Graf file if the extension is “.grf”, or a Postscript file otherwise) containing a plot of 3Jαβ2 versus 3Jαβ3 couplings (Nagayama & Wüthrich, 1981). The theoretical curve based on the Karplus equation given in the library is also drawn, both for a rigid structure (solid line) and for the situation when the χ1 angle is uniformly distributed in the interval delta around a given value (dotted line). Optionally, errorbars can be shown for the coupling constant values.