CYANA Command: enoe diag: Difference between revisions
| Line 10: | Line 10: | ||
This command fits the diagonal decays to obtain the auto-relaxation (rho) values and back-predicted diagonal intensities, I(0) values. | This command fits the diagonal decays to obtain the auto-relaxation (rho) values and back-predicted diagonal intensities, I(0) values. | ||
The parameter '''opt''' specifies if the spin type specific median and standard deviation of | The parameter '''opt''' specifies if the spin type specific median and standard deviation of auto-relaxation (opt=2) values and back-predicted diagonal intensities, I(0) values (opt=3) are calculated. With the back-predicted diagonal intensities there is a pdf file generated containing plots of the fitted intensities divided according to classes with the mean (green line) and std deviation (red line). With the default setting (opt=1), no auto-relaxation values and back-predicted diagonal intensities, I(0) values are calculated, instead the user may read a file or set the value(s) using the atom set command. | ||
In the case of single mixing time measurements, the auo-relaxation value are omitted and the back-predicted diagonal intensities, I(0) values are replaced by the diagonal intensities values measured at the specific mixing time. | In the case of single mixing time measurements, the auo-relaxation value are omitted and the back-predicted diagonal intensities, I(0) values are replaced by the diagonal intensities values measured at the specific mixing time. | ||
Latest revision as of 16:10, 20 November 2019
back to complete commands list
Parameters
- opt=integer
- (default: 1)
- plot =string
- (default: izPlot)
Description
This command fits the diagonal decays to obtain the auto-relaxation (rho) values and back-predicted diagonal intensities, I(0) values.
The parameter opt specifies if the spin type specific median and standard deviation of auto-relaxation (opt=2) values and back-predicted diagonal intensities, I(0) values (opt=3) are calculated. With the back-predicted diagonal intensities there is a pdf file generated containing plots of the fitted intensities divided according to classes with the mean (green line) and std deviation (red line). With the default setting (opt=1), no auto-relaxation values and back-predicted diagonal intensities, I(0) values are calculated, instead the user may read a file or set the value(s) using the atom set command.
In the case of single mixing time measurements, the auo-relaxation value are omitted and the back-predicted diagonal intensities, I(0) values are replaced by the diagonal intensities values measured at the specific mixing time.