CYANA 3.0 Reference Manual: Difference between revisions

From CYANA Wiki
Jump to navigation Jump to search
No edit summary
No edit summary
 
(12 intermediate revisions by 2 users not shown)
Line 1: Line 1:
__NOTOC__
__NOTOC__
== INCLAN ==
== INCLAN (INteractive Command LANguage) ==


* [[INCLAN]]
* [[INCLAN Reference Manual]]


== CYANA Scripts ==
== CYANA Scripts ==
Line 16: Line 16:
== CYANA Commands ==
== CYANA Commands ==


* [[CYANA Commands]]
* [[CYANA Commands]] (complete list)
* [[CYANA Commands#CYANA_Macros|CYANA Macros]]


== CYANA Functions ==
== CYANA Functions ==


* [[CYANA functions]]
* [[CYANA functions]] (complete list)


== CYANA Variables ==
== CYANA Variables ==


* [[CYANA variables]]
* [[CYANA variables]] (complete list)


== Selections ==
== Selections ==


<div style="column-count:4;-moz-column-count:4;-webkit-column-count:4">
<div style="column-count:2;-moz-column-count:2;-webkit-column-count:2">
* [[Selection rules]]
* [[Selection rules]]
</div>
<div style="column-count:2;-moz-column-count:2;-webkit-column-count:2">
* [[Atom selection]]
* [[Atom selection]]
* [[Angle selection]]
* [[Angle selection]]
Line 43: Line 45:
== Input files ==
== Input files ==


<div style="column-count:4;-moz-column-count:4;-webkit-column-count:4">
<div style="column-count:2;-moz-column-count:2;-webkit-column-count:2">
* [[Residue library file]] (.lib)
* [[Residue library file]] (.lib)
* [[Sequence file]] (.seq)
* [[Sequence file]] (.seq)
Line 57: Line 59:
* [[XEASY peak list file]] (.peaks)
* [[XEASY peak list file]] (.peaks)
* [[NMRView peak list file]] (.xpk)
* [[NMRView peak list file]] (.xpk)
* [[auto-relaxation and I(0) values]] (.rho)
</div>
</div>
== Nomenclature ==
* [[Standard CYANA nomenclature|Standard nomenclature for amino acids and nucleotides]]


== Algorithms ==
== Algorithms ==


<div style="column-count:4;-moz-column-count:4;-webkit-column-count:4">
<div style="column-count:2;-moz-column-count:2;-webkit-column-count:2">
* [[Coordinate generation]]
* [[Coordinate generation]]
* [[Target function]]
* [[Target function]]

Latest revision as of 13:22, 17 January 2019