CYANA Command: distances falsify: Difference between revisions
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== Parameters == | == Parameters == | ||
; selection='' | ; selection=''[[distance restraint selection]]'': (default: ''none'') | ||
; fraction=''real'': (default: 0.05) | ; fraction=''real'': (default: 0.05) | ||
; shiftdev=''real'': (default: 100000.0) | ; shiftdev=''real'': (default: 100000.0) | ||
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== Description == | == Description == | ||
Introduces a controlled amount of assignment errors into a list of selected distance restraints. In a randomly selected ''fraction'' of the selected distance restraints the first or second atom assignment is changed to a randomly chosen hydrogen atom or pseudoatom. Optionally, the choice of a new assignment can be restricted to one with a chemical shift deviation from the original assignment that is smaller than ''shiftdev''. Similarly, the choice of a new assignment can be restricted to one with a residue number difference from the original assignment that is smaller than ''resshift''. | |||
into a list of selected distance restraints. In a randomly selected | |||
fraction of the selected distance restraints the first or second | |||
atom assignment is changed to a randomly chosen hydrogen atom | |||
or pseudoatom. Optionally, the choice of a new assignment can be | |||
restricted to one with a chemical shift deviation from the original | |||
assignment that is smaller than | |||
to one with a residue number difference from the original assignment | |||
that is smaller than | |||
Latest revision as of 12:02, 13 August 2009
Parameters
- selection=distance restraint selection
- (default: none)
- fraction=real
- (default: 0.05)
- shiftdev=real
- (default: 100000.0)
- resshift=integer
- (default: 100000)
Description
Introduces a controlled amount of assignment errors into a list of selected distance restraints. In a randomly selected fraction of the selected distance restraints the first or second atom assignment is changed to a randomly chosen hydrogen atom or pseudoatom. Optionally, the choice of a new assignment can be restricted to one with a chemical shift deviation from the original assignment that is smaller than shiftdev. Similarly, the choice of a new assignment can be restricted to one with a residue number difference from the original assignment that is smaller than resshift.