CYANA Macro: dcostat: Difference between revisions

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; file=''filename''.ps: (default: dcostat.ps)
; file=''filename''.ps: (default: dcostat.ps)
; classes=''integer'': (default: 3)


== Description ==
== Description ==


Produces a graphics output file with the given name (a Graf file if the extension is ".grf", or a Postscript file otherwise) with two plots that show the distribution of distance restraints. The first plot shows the number of distance restraints plotted against the residue index difference of the corresponding atoms. The second plot shows the number of short-range (between residues ''i'' and ''j'' with |''i'' - ''j''| ≤ 1; light grey), medium-range (1 < |''i'' - ''j''| < 5; dark grey) and long-range (|''i'' - ''j''| ≥ 5; black) distance restraints.  If the number of ''classes'' is increased to 4, then the short-range distance restraints are further classified as intra-residual (|''i'' - ''j''| = 0; white) or sequential (|''i'' - ''j''| = 1; light grey).
Produces a graphics output file with the given name (a Graf file if the extension is ".grf", or a Postscript file otherwise) with two plots that show the distribution of distance restraints. The first plot shows the number of distance restraints plotted against the residue index difference of the corresponding atoms. The second plot shows for every residue the number of intra-residual (white), short range (vertically hatched), medium-range (horizontally hatched) and long-range (black) restraints.

Latest revision as of 16:46, 12 January 2010

Parameters

file=filename.ps
(default: dcostat.ps)
classes=integer
(default: 3)

Description

Produces a graphics output file with the given name (a Graf file if the extension is ".grf", or a Postscript file otherwise) with two plots that show the distribution of distance restraints. The first plot shows the number of distance restraints plotted against the residue index difference of the corresponding atoms. The second plot shows for every residue the number of intra-residual (white), short range (vertically hatched), medium-range (horizontally hatched) and long-range (black) restraints.