Distances set: Difference between revisions
Jump to navigation
Jump to search
m (1 revision) |
|||
| (38 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
= distances_set = | |||
== Parameters == | |||
; selection=''string'': (default: ''none'') | |||
; bound=''string'': (default: ''none'') | |||
; selection=''string'' | ; weight=''string'': (default: ''none'') | ||
: (default: | ; confine=''string'': (default: ''none'') | ||
; bound | |||
: (default: | |||
; weight | |||
: (default: | |||
; confine | |||
: (default: | |||
== Description == | == Description == | ||
This command sets properties of the distance restraints that match the | This command sets properties of the distance restraints that match the | ||
selection | selection ''string''. By default, the selection made in the most recent | ||
'distances select' command is used, or all distance restraints if no | '''distances select''' command is used, or all distance restraints if no | ||
selection has been made so far. | selection has been made so far. | ||
Properties that can be set: | Properties that can be set: | ||
* | * bound distance bound, given in Angstrom | ||
* | * weight relative weight | ||
* | * confine confinement limit for violation confinement, given in Angstrom | ||
The value of 'bound' parameter can be an arbitrary real expression that | The value of '''bound''' parameter can be an arbitrary real expression that | ||
may contain the symbols 'distance', 'distdev', 'distmin', and 'distmax' | may contain the symbols '''distance''', '''distdev''', '''distmin''', and '''distmax''' | ||
to denote, respectively, the average value, the standard deviation, | to denote, respectively, the average value, the standard deviation, | ||
the minimal value, and the the maximal value of the corresponding | the minimal value, and the the maximal value of the corresponding | ||
distance in the selected structures. | distance in the selected structures. | ||
Latest revision as of 20:18, 28 January 2009
distances_set
Parameters
- selection=string
- (default: none)
- bound=string
- (default: none)
- weight=string
- (default: none)
- confine=string
- (default: none)
Description
This command sets properties of the distance restraints that match the selection string. By default, the selection made in the most recent distances select command is used, or all distance restraints if no selection has been made so far.
Properties that can be set:
- bound distance bound, given in Angstrom
- weight relative weight
- confine confinement limit for violation confinement, given in Angstrom
The value of bound parameter can be an arbitrary real expression that may contain the symbols distance, distdev, distmin, and distmax to denote, respectively, the average value, the standard deviation, the minimal value, and the the maximal value of the corresponding distance in the selected structures.