Tutorials: Difference between revisions

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== Downloads ==
== Downloads ==


<!--* Latest [[Media:cyana-3.0demo-121024.tgz‎|demo version of CYANA 3.0beta]] for Linux and Mac OSX (24.10.2012)<br>The demo version has the full functionality of the program for the protein sequences that are used in the example calculations.<br>'''The regular CYANA version 3.0 is not released yet.'''
* Latest [[Media:cyana-3.98.15bin-230101Demo.tgz|demo version of CYANA 3.98.15]] for Linux and MacOS (01.01.2023)<br>The demo version has the full functionality of the program for the protein sequences that are used in the example calculations.
* Latest [[Media:cyana-3.96bin-140115demo.tgz‎|demo version of CYANA 3.96beta]] for Linux and Mac OSX (14.01.2014)<br>The demo version has the full functionality of the program for the protein sequences that are used in the example calculations.<br>'''The regular CYANA version 3.96 is not released yet.'''
* On certain Mac systems, you must execute the command 'xattr -r -d com.apple.quarantine cyana-3.98.15' after unpacking CYANA to allow execution of the programs.
* Latest [[Media:cyana-3.97bin-141013demo.tgz‎|demo version of CYANA 3.97beta]] for Linux and Mac OSX (13.10.2014)<br>The demo version has the full functionality of the program for the protein sequences that are used in the example calculations.<br>'''The regular CYANA version 3.97 is not released yet.'''
* [http://www.cyana.org/demo-results.tgz Results of all CYANA 3.98.13 demo calculations] (93 MB).
* Latest [[Media:cyana-3.97bin-150428demo.tgz‎|demo version of CYANA 3.97beta]] for Linux and Mac OSX (28.04.2015)<br>The demo version has the full functionality of the program for the protein sequences that are used in the example calculations.<br>'''The regular CYANA version 3.97 is not released yet.'''
* [[Media:Cyana-3.0-demo.zip|Input data files]] for example calculations with CYANA 3.0 (also included with the demo version of CYANA). Not all of the demos are working with CYANA 2.1 or earlier.
* Latest [[Media:cyana-3.97bin-150623demo.tgz‎|demo version of CYANA 3.97beta]] for Linux and Mac OSX (23.06.2015)<br>The demo version has the full functionality of the program for the protein sequences that are used in the example calculations.<br>'''The regular CYANA version 3.97 is not released yet.'''
* Latest [[Media:cyana-3.97bin-160108Demo.tgz‎|demo version of CYANA 3.97beta]] for Linux and Mac OSX (08.01.2016)<br>The demo version has the full functionality of the program for the protein sequences that are used in the example calculations.<br>
* Latest [[Media:cyana-3.97bin-161123Demo.tgz‎|demo version of CYANA 3.97beta]] for Linux and Mac OSX (23.11.2016)<br>The demo version has the full functionality of the program for the protein sequences that are used in the example calculations.<br>
* Latest [[Media:cyana-3.98bin-170805Demo.tgz‎|demo version of CYANA 3.98beta]] for Linux and Mac OSX (05.08.2017)<br>The demo version has the full functionality of the program for the protein sequences that are used in the example calculations.<br>
* Latest [[Media:cyana-3.98bin-170912Demo.tgz‎|demo version of CYANA 3.98beta]] for Linux and Mac OSX (12.09.2017)<br>The demo version has the full functionality of the program for the protein sequences that are used in the example calculations.<br>
* Latest [[Media:cyana-3.98bin-170926Demo.tgz‎|demo version of CYANA 3.98beta]] for Linux and Mac OSX (26.09.2017)<br>The demo version has the full functionality of the program for the protein sequences that are used in the example calculations.<br>
* Latest [[Media:cyana-3.98bin-171218Demo.tgz‎|demo version of CYANA 3.98beta]] for Linux and Mac OSX (18.12.2017)<br>The demo version has the full functionality of the program for the protein sequences that are used in the example calculations.<br>
* Latest [[Media:cyana-3.98bin-180131Demo.tgz‎|demo version of CYANA 3.98beta]] for Linux and Mac OSX (31.01.2018)<br>The demo version has the full functionality of the program for the protein sequences that are used in the example calculations.<br>
* Latest [[Media:cyana-3.98bin-180213Demo.tgz‎|demo version of CYANA 3.98beta]] for Linux and Mac OSX (13.02.2018)<br>The demo version has the full functionality of the program for the protein sequences that are used in the example calculations.<br>
* Latest [[Media:cyana-3.98bin-180216Demo.tgz‎|demo version of CYANA 3.98beta]] for Linux and Mac OSX (16.02.2018)<br>The demo version has the full functionality of the program for the protein sequences that are used in the example calculations.<br>
* Latest [[Media:cyana-3.98.5bin-181217Demo.tgz‎|demo version of CYANA 3.98.5beta]] for Linux and Mac OSX (17.12.2018)<br>The demo version has the full functionality of the program for the protein sequences that are used in the example calculations.<br>-->
* Latest [[Media:cyana-3.98.10bin-190404Demo.tgz‎|demo version of CYANA 3.98.10beta]] for Linux and Mac OSX (04.04.2019)<br>The demo version has the full functionality of the program for the protein sequences that are used in the example calculations.<br>


== INCLAN Tutorials ==
== INCLAN Tutorials ==
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== CYANA Tutorials ==
== CYANA Tutorials ==
<!--
* [[Automated resonance assignment with FLYA (Brazil 2018)|Complex Structure calculation]]
-->


* [[Automated resonance assignment with FLYA (EMBO 2017)|Automated resonance assignment with FLYA]] (EMBO Practical Course NMR in Basel, 5-12 August 2017)
<!--* [[Automated resonance assignment with FLYA (EMBO 2015)|Automated resonance assignment with FLYA]] (EMBO Practical Course NMR in Munich, 31 July - 7 August 2015)
* [[Automated resonance assignment with FLYA (Gothenburg 2014)|Automated resonance assignment with FLYA]] (Biomolecular NMR course at the Swedish NMR Centre, Gothenburg, 15 October 2014)
* [[Automated resonance assignment with FLYA (EMBO 2013)|Automated resonance assignment with FLYA]] (EMBO Practical Course NMR in Basel, 20–27 July 2013)
-->
* [[Defining non-standard residues]]
* [[Defining non-standard residues]]
<!--
<!--
Line 46: Line 24:
* [[Structure calculation with automated NOESY assignment]]
* [[Structure calculation with automated NOESY assignment]]
* [[Homodimer structure calculation with automated NOESY assignment]]
* [[Homodimer structure calculation with automated NOESY assignment]]
* [[ENORA and multi-state structure calculations]]
* [[Identification of key NOEs]]
* [[Determination of the protein state populations]]
* [[Determination of the protein number of states]]
* [[Peaklist preparation for eNOE pipeline]]
<!--
<!--
* [[Structure calculations using residual dipolar coupling restraints]]
* [[Structure calculations using residual dipolar coupling restraints]]
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** [[Calculate RMSD values and mean structures]]
** [[Calculate RMSD values and mean structures]]
** [[Angle restraints from the program TALOS]]
** [[Angle restraints from the program TALOS]]
-->
== Courses ==
=== Biomolecular NMR: Advanced tools PhD course ===
Gothenburg, 27 September - 8 October 2021 ([https://www.gu.se/en/event/biomolecular-nmr-advanced-tools-0 course homepage])
* [[Automated resonance assignment with FLYA (Gothenburg 2021)|Automated resonance assignment with FLYA]]
* [[Structure calculation and automated NOESY assignment with CYANA (Gothenburg 2021)|Structure calculation and automated NOESY assignment with CYANA]]
<!--
=== EMBO Practical Course: Structure, dynamics and function of biomacromolecules by NMR 2019 ===
Garching bei München, 26 July - 2 August 2019 ([http://embo2019.bnmrz.org/ course homepage])
* [[Structure calculation and automated NOESY assignment with CYANA (EMBO 2019)|Structure calculation and automated NOESY assignment with CYANA]]
* [[Automated resonance assignment with FLYA (EMBO 2019)|Automated resonance assignment with FLYA]]
* [[Automated resonance assignment with FLYA (Brazil 2018)|Complex Structure calculation]]
* [[Automated resonance assignment with FLYA (EMBO 2017)|Automated resonance assignment with FLYA]] (EMBO Practical Course NMR in Basel, 5-12 August 2017)-->
<!--* [[Automated resonance assignment with FLYA (EMBO 2015)|Automated resonance assignment with FLYA]] (EMBO Practical Course NMR in Munich, 31 July - 7 August 2015)
* [[Automated resonance assignment with FLYA (Gothenburg 2014)|Automated resonance assignment with FLYA]] (Biomolecular NMR course at the Swedish NMR Centre, Gothenburg, 15 October 2014)
* [[Automated resonance assignment with FLYA (EMBO 2013)|Automated resonance assignment with FLYA]] (EMBO Practical Course NMR in Basel, 20–27 July 2013)
-->
-->



Revision as of 17:48, 17 February 2023

Downloads

  • Latest demo version of CYANA 3.98.15 for Linux and MacOS (01.01.2023)
    The demo version has the full functionality of the program for the protein sequences that are used in the example calculations.
  • On certain Mac systems, you must execute the command 'xattr -r -d com.apple.quarantine cyana-3.98.15' after unpacking CYANA to allow execution of the programs.
  • Results of all CYANA 3.98.13 demo calculations (93 MB).

INCLAN Tutorials

CYANA Tutorials

CYANA example calculations

Courses

Biomolecular NMR: Advanced tools PhD course

Gothenburg, 27 September - 8 October 2021 (course homepage)


Input file formats