CYANA Command: enoe sig: Difference between revisions

From CYANA Wiki

Latest revision as of 17:08, 11 September 2019

This command fits the the cross peak buildups to obtain the experimental cross relaxation values values.

The parameter opt allows to fit the original experimental cross peak intensities (opt=1) or the spin-diffusion corrected ones (opt=2).

In the case of a single point measurement, sigma is obtained from sinh^-1 = log(sqrt(z^2+1) + z), where z corresponds to the experimental intensity.

@@ Line 4: / Line 4: @@
 ; opt=''integer'': (default: ''1'')
-; plot =''string'': (default: ''izPlot'')
 == Description ==
-This command fits the diagonal decays to obtain the auto-relaxation (rho) values  and back-predicted diagonal intensities, I(0) values.
+This command fits the the cross peak buildups to obtain the experimental cross relaxation values values.
-The parameter '''opt''' specifies if the spin type specific median and standard deviation of auo-relaxation (opt=2) values and back-predicted diagonal intensities, I(0) values (opt=3) are calculated are written to file. With the back-predicted diagonal intensities there is a pdf file generated containing plots of the fitted intensities divided according to classes with the mean (green line) and std deviation (red line).
+The parameter '''opt''' allows to fit the original experimental cross peak intensities (opt=1) or the spin-diffusion corrected ones (opt=2).
-In the case of single mixing time measurements, the auo-relaxation value are omitted and the back-predicted diagonal intensities, I(0) values are replaced by the diagonal intensities values measured at the specific mixing time.
+In the case of a single point measurement, sigma is obtained from sinh^-1 = log(sqrt(z^2+1) + z), where z corresponds to the experimental intensity.