CYANA Command: distances vdw

Parameters

first=atom selection

(required)

second=atom selection

(required)

limit=real

(default: -1.0)

increment=real

(default: 0.0)

levels=integer range

(default: -99999..99999)

Description

Sets or modifies the lower distance limits for the steric repulsion between atoms matched by the first and second selections if their residue index difference is within the levels range. The lower distance bound is set to the given limit, if present, or increased from its current value by the given increment otherwise.