CYANA script: cyanajob: Difference between revisions

From CYANA Wiki
Jump to navigation Jump to search
m (1 revision)
 
No edit summary
Line 1: Line 1:
== Synopsis ==


Synopsis: cyanajob [option] macro parameters
'''cyanajob [''option''] ''macro parameters'''''
 
== Description ==


The '''cyanajob''' shell script starts CYANA to execute the given ''macro'' as
The '''cyanajob''' shell script starts CYANA to execute the given ''macro'' as
Line 17: Line 20:
Options:
Options:


  -h  help
;-h: help
  -a ''file'' start job only after ''file'' exists
;-a ''file'': start job only after ''file'' exists
  -j ''name'' job name (default: ''macro'')
;-j ''name'': job name (default: ''macro'')
  -n ''nproc'' number of processors
;-n ''nproc'': number of processors
  -o ''options''  options for the CYANA program
;-o ''options'': options for the CYANA program
  -p ''program''  name of the CYANA start script (default: cyana)
;-p ''program'': name of the CYANA start script (default: cyana)
  -q ''queue'' batch queue
;-q ''queue'': batch queue
  -s ''command''  submit command
;-s ''command'': submit command
  -S  run CYANA in safe (restriced) mode
;-S: run CYANA in safe (restriced) mode


Frequently used options are '''-n''' to set the number of processors used in
Frequently used options are '''-n''' to set the number of processors used in
Line 34: Line 37:
== See also ==
== See also ==


* [[cyana]]
* [[CYANA script: cyana|cyana]]

Revision as of 16:52, 11 August 2009

Synopsis

cyanajob [option] macro parameters

Description

The cyanajob shell script starts CYANA to execute the given macro as batch or background job. The macro name can be given with or without the .cya extension. The cyanajob script is the preferred way to start a parallel CYANA calculation. For interactive use, CYANA is started through the cyana script.

The cyanajob command can only be invoked from the Unix shell. The command syntax follows Unix (not INCLAN) conventions.

The cyanajob script is machine-dependent and must be adapted to the particular application environment. The machine-dependent default values of the following options can be inspected by using the -h option.

Options:

-h
help
-a file
start job only after file exists
-j name
job name (default: macro)
-n nproc
number of processors
-o options
options for the CYANA program
-p program
name of the CYANA start script (default: cyana)
-q queue
batch queue
-s command
submit command
-S
run CYANA in safe (restriced) mode

Frequently used options are -n to set the number of processors used in parallel, -p to specify the command by which CYANA is started (e.g. if several different versions of the program are installed on the system), and -q to choose a certain batch queue.

See also