CYANA Commands: Difference between revisions
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* [[CYANA Command: couplings select|couplings select]] | * [[CYANA Command: couplings select|couplings select]] | ||
* [[CYANA Command: couplings set|couplings set]] | * [[CYANA Command: couplings set|couplings set]] | ||
=== D === | |||
* [[CYANA Command: distances calculate|distances calculate]] | * [[CYANA Command: distances calculate|distances calculate]] | ||
* [[CYANA Command: distances check|distances check]] | * [[CYANA Command: distances check|distances check]] | ||
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* [[CYANA Command: distances unique|distances unique]] | * [[CYANA Command: distances unique|distances unique]] | ||
* [[CYANA Command: distances vdw|distances vdw]] | * [[CYANA Command: distances vdw|distances vdw]] | ||
=== G === | |||
* [[CYANA Command: gradient|gradient]] | * [[CYANA Command: gradient|gradient]] | ||
* [[CYANA Command: grid aco|grid aco]] | * [[CYANA Command: grid aco|grid aco]] | ||
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* [[CYANA Command: grid search|grid search]] | * [[CYANA Command: grid search|grid search]] | ||
* [[CYANA Command: grid swap|grid swap]] | * [[CYANA Command: grid swap|grid swap]] | ||
=== L === | |||
* [[CYANA Command: library check|library check]] | * [[CYANA Command: library check|library check]] | ||
* [[CYANA Command: library mirror|library mirror]] | * [[CYANA Command: library mirror|library mirror]] | ||
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* [[CYANA Command: library rename|library rename]] | * [[CYANA Command: library rename|library rename]] | ||
* [[CYANA Command: library replace|library replace]] | * [[CYANA Command: library replace|library replace]] | ||
=== M === | |||
* [[CYANA Command: md|md]] | * [[CYANA Command: md|md]] | ||
* [[CYANA Command: minimize|minimize]] | * [[CYANA Command: minimize|minimize]] | ||
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* [[CYANA Command: molecules identity|molecules identity]] | * [[CYANA Command: molecules identity|molecules identity]] | ||
* [[CYANA Command: molecules symdist|molecules symdist]] | * [[CYANA Command: molecules symdist|molecules symdist]] | ||
=== P === | |||
* [[CYANA Command: pcs axial|pcs axial]] | * [[CYANA Command: pcs axial|pcs axial]] | ||
* [[CYANA Command: pcs count|pcs count]] | * [[CYANA Command: pcs count|pcs count]] | ||
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* [[CYANA Command: peaks unique|peaks unique]] | * [[CYANA Command: peaks unique|peaks unique]] | ||
* [[CYANA Command: randomize|randomize]] | * [[CYANA Command: randomize|randomize]] | ||
=== R === | |||
* [[CYANA Command: rdc count|rdc count]] | * [[CYANA Command: rdc count|rdc count]] | ||
* [[CYANA Command: rdc delete|rdc delete]] | * [[CYANA Command: rdc delete|rdc delete]] | ||
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* [[CYANA Command: read xpk|read xpk]] | * [[CYANA Command: read xpk|read xpk]] | ||
* [[CYANA Command: read xplor|read xplor]] | * [[CYANA Command: read xplor|read xplor]] | ||
=== S === | |||
* [[CYANA Command: shifts adapt|shifts adapt]] | * [[CYANA Command: shifts adapt|shifts adapt]] | ||
* [[CYANA Command: shifts assign|shifts assign]] | * [[CYANA Command: shifts assign|shifts assign]] | ||
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* [[CYANA Command: structures swap|structures swap]] | * [[CYANA Command: structures swap|structures swap]] | ||
* [[CYANA Command: structures violate|structures violate]] | * [[CYANA Command: structures violate|structures violate]] | ||
=== W === | |||
* [[CYANA Command: write aco|write aco]] | * [[CYANA Command: write aco|write aco]] | ||
* [[CYANA Command: write ang|write ang]] | * [[CYANA Command: write ang|write ang]] | ||
Revision as of 16:12, 11 August 2009
CYANA Commands
A
- angles count
- angles delete
- angles flip
- angles ramachandran
- angles select
- angles set
- angles split
- angstat clear
- angstat list
- angstat make
- assign
- atoms attach
- atoms calibrate
- atoms count
- atoms glomsa
- atoms list
- atoms observable
- atoms select
- atoms set
- atoms stereo
- atoms swap
C
D
- distances calculate
- distances check
- distances combine
- distances compare
- distances correct
- distances count
- distances delete
- distances expand
- distances falsify
- distances hbond
- distances make
- distances modify
- distances multiple
- distances select
- distances set
- distances short
- distances split
- distances stat
- distances stereoexpand
- distances unique
- distances vdw
G
L
M
P
- pcs axial
- pcs count
- pcs delete
- pcs list
- pcs make
- pcs rhombic
- pcs select
- pcs set
- peaks backcal
- peaks calibrate
- peaks count
- peaks create
- peaks delete
- peaks deviations
- peaks distance
- peaks filter
- peaks fit
- peaks protonize
- peaks select
- peaks set
- peaks simplecal
- peaks split
- peaks unassign
- peaks unique
- randomize
R
- rdc count
- rdc delete
- rdc distance
- rdc fittensor
- rdc list
- rdc make
- rdc select
- rdc set
- rdc tensor
- read aco
- read ang
- read bmrb
- read cco
- read cor
- read lib
- read lol
- read nmrview
- read pcs
- read pdb
- read peaks
- read prot
- read rdc
- read upl
- read xpk
- read xplor
S
- shifts adapt
- shifts assign
- shifts check
- shifts collapse
- shifts consolidate
- shifts converge
- shifts d2o
- shifts incomplete
- shifts initialize
- shifts missing
- shifts randomcoil
- shifts renumber
- shifts unusual
- structures clear
- structures copy
- structures hbonds
- structures insert
- structures list
- structures mean
- structures overlay
- structures secondary
- structures select
- structures sort
- structures swap
- structures violate
W
CYANA Macros
- anneal
- calc_all
- caliba
- calibration
- cashiftaco
- cashiftplot
- cisprocheck
- coco
- cyscheck
- dcostat
- dcotab
- deposit
- dinucleotide
- flip
- forall
- garant
- graf
- gridplot
- habas
- hbond
- init
- initsafe
- karplus
- kringle
- longrangeplot
- loop
- makeaco
- noeassign
- onelettercode
- opalprefine
- overlay
- overview
- peakcheck
- prolinebond
- ramaaco
- ramaplot
- random_all
- rdcdistances
- read_all
- readdata
- redac
- renumber
- rmsd
- rotameraco
- savestereo
- seqplot
- ssbond
- stereoassign
- structcalc
- sugarbond
- sugarring
- syscheck
- talosaco
- taloslist
- threelettercode
- translate
- vtfmin
- watsoncrick
- write_all