CYANA Commands: Difference between revisions
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Revision as of 16:23, 11 August 2009
CYANA Commands
- angles count
- angles delete
- angles flip
- angles ramachandran
- angles select
- angles set
- angles split
- angstat clear
- angstat list
- angstat make
- assign
- atoms attach
- atoms calibrate
- atoms count
- atoms glomsa
- atoms list
- atoms observable
- atoms select
- atoms set
- atoms stereo
- atoms swap
- calibrate
- couplings count
- couplings delete
- couplings make
- couplings select
- couplings set
- distances calculate
- distances check
- distances combine
- distances compare
- distances correct
- distances count
- distances delete
- distances expand
- distances falsify
- distances hbond
- distances make
- distances modify
- distances multiple
- distances select
- distances set
- distances short
- distances split
- distances stat
- distances stereoexpand
- distances unique
- distances vdw
- gradient
- grid aco
- grid correlate
- grid fragment
- grid memory
- grid search
- grid swap
- library check
- library mirror
- library new
- library remove
- library rename
- library replace
- md
- minimize
- molecules define
- molecules identity
- molecules symdist
- pcs axial
- pcs count
- pcs delete
- pcs list
- pcs make
- pcs rhombic
- pcs select
- pcs set
- peaks backcal
- peaks calibrate
- peaks count
- peaks create
- peaks delete
- peaks deviations
- peaks distance
- peaks filter
- peaks fit
- peaks protonize
- peaks select
- peaks set
- peaks simplecal
- peaks split
- peaks unassign
- peaks unique
- randomize
- rdc count
- rdc delete
- rdc distance
- rdc fittensor
- rdc list
- rdc make
- rdc select
- rdc set
- rdc tensor
- read aco
- read ang
- read bmrb
- read cco
- read cor
- read lib
- read lol
- read nmrview
- read pcs
- read pdb
- read peaks
- read prot
- read rdc
- read upl
- read xpk
- read xplor
- shifts adapt
- shifts assign
- shifts check
- shifts collapse
- shifts consolidate
- shifts converge
- shifts d2o
- shifts incomplete
- shifts initialize
- shifts missing
- shifts randomcoil
- shifts renumber
- shifts unusual
- structures clear
- structures copy
- structures hbonds
- structures insert
- structures list
- structures mean
- structures overlay
- structures secondary
- structures select
- structures sort
- structures swap
- structures violate
- write aco
- write ang
- write assign
- write bmrb
- write cco
- write cor
- write lib
- write lol
- write pcs
- write pdb
- write peaks
- write prot
- write rdc
- write seq
- write sparky
- write upl
- write xpk
CYANA Macros
- anneal
- calc_all
- caliba
- calibration
- cashiftaco
- cashiftplot
- cisprocheck
- coco
- cyscheck
- dcostat
- dcotab
- deposit
- dinucleotide
- flip
- forall
- garant
- graf
- gridplot
- habas
- hbond
- init
- initsafe
- karplus
- kringle
- longrangeplot
- loop
- makeaco
- noeassign
- onelettercode
- opalprefine
- overlay
- overview
- peakcheck
- prolinebond
- ramaaco
- ramaplot
- random_all
- rdcdistances
- read_all
- readdata
- redac
- renumber
- rmsd
- rotameraco
- savestereo
- seqplot
- ssbond
- stereoassign
- structcalc
- sugarbond
- sugarring
- syscheck
- talosaco
- taloslist
- threelettercode
- translate
- vtfmin
- watsoncrick
- write_all