CYANA 3.0 Reference Manual: Difference between revisions
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== CYANA Variables == | == CYANA Variables == | ||
Revision as of 16:17, 11 August 2009
- INCLAN (INteractive Command LANguage)
- CYANA scripts
- CYANA commands
- CYANA functions
- CYANA variables
CYANA Variables
- aco_type
- combine_oi
- corr14
- cross_oi_rdc
- cut_aco
- cut_cco
- cut_lol
- cut_pcs
- cut_rdc
- cut_tflocal
- cut_upl
- cut_vdw
- expand
- gridpoints
- gridtime
- hb_ang
- hb_len
- level
- nstep
- obsdis
- oie_k1
- oie_k2
- oi_k1
- oi_k2
- oip_end
- oip_max
- oip_min
- oip_scaling
- oip_start
- ois_k1
- ois_k2
- opt_tensor_count
- opt_tensor
- opt_tensor_start
- opt_tensor_treshold
- pcs_end_k1
- pcs_start_k1
- pcs_ws_on
- positive_gyros
- pseudo
- rdc_potential
- rdc_vas1_on
- rdc_vas2_on
- rdc_vts_on
- seed
- soft_aco
- soft_cco
- soft_lol
- soft_upl
- soft_vdw
- swap
- tf_asymptote
- tf_offset
- tf_type
- tolerance
- tolpeak
- trad_end_k1
- trad_start_k1
- upl_values
- use_svd
- variables
- vdw_power
- viocap
- weight_aco
- weight_cco
- weight_ide
- weight_lol
- weight_pcs
- weight_rdc
- weight_sym
- weight_upl
- weight_vdw
Selections
Input files
- Residue library file (.lib)
- Sequence file (.seq)
- Distance restraint file (.upl, .lol)
- Torsion angle restraint file (.aco)
- Residual dipolar coupling restraint file (.rdc)
- Pseudocontact shift restraint file (.pcs)
- DG Cartesian coordinate file (.cor)
- PDB coordinate file (.pdb)
- Torsion angle file (.ang)
- XEASY chemical shift list file (.prot)
- BMRB chemical shift list file (.bmrb)
- XEASY peak list file (.peaks)
- NMRView peak list file (.xpk)